Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 CYB5R2-212ENST00000533558 1658 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
VPS45Q9NRW7 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 MIR4497-201ENST00000583208 89 ntBASIC20.88■□□□□ 0.93
VPS45Q9NRW7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
VPS45Q9NRW7 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 SAPCD2P1-201ENST00000395413 1184 ntBASIC20.87■□□□□ 0.93
VPS45Q9NRW7 MIR1224-201ENST00000408193 85 ntBASIC20.87■□□□□ 0.93
VPS45Q9NRW7 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 GATS-209ENST00000454084 1030 ntTSL 3 BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.87■□□□□ 0.93
VPS45Q9NRW7 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 STAC-204ENST00000457375 1366 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 NUF2-208ENST00000524800 1845 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 FAM197Y4-202ENST00000622692 608 ntBASIC20.86■□□□□ 0.93
VPS45Q9NRW7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 PKMYT1-213ENST00000574385 1892 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
VPS45Q9NRW7 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 AC007322.3-201ENST00000426526 701 ntBASIC20.85■□□□□ 0.93
VPS45Q9NRW7 ECEL1P3-201ENST00000427961 737 ntBASIC20.85■□□□□ 0.93
VPS45Q9NRW7 CDV3P1-201ENST00000471403 739 ntBASIC20.85■□□□□ 0.93
VPS45Q9NRW7 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC20.85■□□□□ 0.93
VPS45Q9NRW7 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
VPS45Q9NRW7 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.2 ms