Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 AC105036.2-201ENST00000569468 176 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AC116050.2-201ENST00000612102 1779 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 AC008694.1-202ENST00000636953 945 ntBASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NECTIN3Q9NQS3 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 CASP6-205ENST00000505486 538 ntTSL 4 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 AC104771.1-201ENST00000603335 964 ntBASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 FAM21FP-204ENST00000608637 956 ntBASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 OR10C1-204ENST00000622521 1039 ntBASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC19.37■□□□□ 0.69
NECTIN3Q9NQS3 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 AL109923.1-201ENST00000618799 583 ntBASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC19.36■□□□□ 0.69
NECTIN3Q9NQS3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 SAPCD2P1-201ENST00000395413 1184 ntBASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 GUSBP6-202ENST00000438529 1198 ntBASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 VMO1-204ENST00000441199 741 ntTSL 2 BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 TSPY6P-201ENST00000448518 926 ntBASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
NECTIN3Q9NQS3 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 FAM69B-202ENST00000371692 1668 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 HOXA4-202ENST00000428284 1595 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
NECTIN3Q9NQS3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.69
NECTIN3Q9NQS3 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms