Protein–RNA interactions for Protein: Q9NPJ1

MKKS, McKusick-Kaufman/Bardet-Biedl syndromes putative chaperonin, humanhuman

Predicted RBP Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKKSQ9NPJ1 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 MFF-205ENST00000354503 1085 ntTSL 2 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 GAS7-202ENST00000396115 929 ntTSL 5 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 CRK-204ENST00000574295 1391 ntTSL 5 BASIC19.17■□□□□ 0.66
MKKSQ9NPJ1 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 JPT1-206ENST00000476258 2289 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
MKKSQ9NPJ1 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 POU5F1P3-201ENST00000428824 1078 ntBASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 UNC93B5-201ENST00000530315 699 ntBASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 KRT8P36-201ENST00000489121 1440 ntBASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 SOX3-201ENST00000370536 2132 ntAPPRIS P1 BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
MKKSQ9NPJ1 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
MKKSQ9NPJ1 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 NKX6-1-202ENST00000515820 2194 ntTSL 3 BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 AC092368.3-202ENST00000574180 1591 ntBASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
MKKSQ9NPJ1 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 PNMA6B-201ENST00000538162 1200 ntBASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 PLK5-205ENST00000642079 1969 ntBASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
MKKSQ9NPJ1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms