Protein–RNA interactions for Protein: Q9H2F9

CCDC68, Coiled-coil domain-containing protein 68, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC68Q9H2F9 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC68Q9H2F9 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.83
CCDC68Q9H2F9 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 C2orf50-202ENST00000405022 980 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 AC013268.1-206ENST00000638368 961 ntBASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 AC112229.1-201ENST00000639295 961 ntBASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
CCDC68Q9H2F9 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 ANKRD20A6P-201ENST00000618763 204 ntBASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
CCDC68Q9H2F9 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 PAQR9-201ENST00000340634 2452 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 TPSAB1-201ENST00000338844 1175 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.24■□□□□ 0.83
CCDC68Q9H2F9 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 PGM5P4-201ENST00000421970 445 ntBASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 PBX1-209ENST00000485769 834 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 CASP6-205ENST00000505486 538 ntTSL 4 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 CD247-201ENST00000362089 1609 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CCDC68Q9H2F9 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 AL162430.1-201ENST00000480705 870 ntBASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CCDC68Q9H2F9 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC20.21■□□□□ 0.83
CCDC68Q9H2F9 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms