Protein–RNA interactions for Protein: Q9H0U4

RAB1B, Ras-related protein Rab-1B, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB1BQ9H0U4 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 TMEM11-201ENST00000317635 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 C1QBPP2-201ENST00000528754 825 ntBASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 AC069544.1-201ENST00000609399 999 ntBASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.17■□□□□ 0.34
RAB1BQ9H0U4 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 KRT8P36-201ENST00000489121 1440 ntBASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 PDXK-205ENST00000398081 2251 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 RN7SL471P-201ENST00000580476 299 ntBASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 AL359736.2-201ENST00000621992 437 ntBASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB1BQ9H0U4 STK25-205ENST00000405883 1904 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 RPPH1-201ENST00000516869 333 ntBASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 RNF121-214ENST00000533380 870 ntTSL 3 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 AC120498.8-201ENST00000614275 531 ntBASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 AC006557.6-201ENST00000623071 864 ntBASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
RAB1BQ9H0U4 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC17.14■□□□□ 0.34
RAB1BQ9H0U4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.34
RAB1BQ9H0U4 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 STK25-234ENST00000535007 2459 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
RAB1BQ9H0U4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms