Protein–RNA interactions for Protein: Q96KR7

PHACTR3, Phosphatase and actin regulator 3, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR3Q96KR7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC26.67■■□□□ 1.86
PHACTR3Q96KR7 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC26.67■■□□□ 1.86
PHACTR3Q96KR7 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 BID-203ENST00000399765 1879 ntTSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 ADAM9-203ENST00000466936 2053 ntTSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC26.66■■□□□ 1.86
PHACTR3Q96KR7 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 POM121L13P-201ENST00000422362 380 ntBASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 HES2-206ENST00000489730 730 ntTSL 2 BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 AC069544.1-201ENST00000609399 999 ntBASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 AC120498.8-201ENST00000614275 531 ntBASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC26.65■■□□□ 1.86
PHACTR3Q96KR7 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 DET1-205ENST00000558413 583 ntTSL 4 BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 AC142381.4-202ENST00000563973 229 ntBASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
PHACTR3Q96KR7 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
PHACTR3Q96KR7 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PHACTR3Q96KR7 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.85
PHACTR3Q96KR7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC26.64■■□□□ 1.85
PHACTR3Q96KR7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
PHACTR3Q96KR7 H19-201ENST00000411754 1788 ntTSL 5 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 HHIPL1-202ENST00000357223 2241 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 AL158047.1-201ENST00000445918 881 ntBASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 RN7SL471P-201ENST00000580476 299 ntBASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 LHX9-206ENST00000561173 2144 ntTSL 5 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC26.63■■□□□ 1.85
PHACTR3Q96KR7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 AL359736.2-201ENST00000621992 437 ntBASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
PHACTR3Q96KR7 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
PHACTR3Q96KR7 KRT17P3-201ENST00000420566 1262 ntBASIC26.61■■□□□ 1.85
PHACTR3Q96KR7 THEM4-205ENST00000489410 643 ntTSL 2 BASIC26.61■■□□□ 1.85
PHACTR3Q96KR7 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC26.61■■□□□ 1.85
PHACTR3Q96KR7 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms