Protein–RNA interactions for Protein: Q96B33

CLDN23, Claudin-23, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN23Q96B33 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CLDN23Q96B33 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CLDN23Q96B33 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.39■□□□□ 0.85
CLDN23Q96B33 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN23Q96B33 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC20.39■□□□□ 0.85
CLDN23Q96B33 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CLDN23Q96B33 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 AL390955.1-201ENST00000428694 934 ntBASIC20.38■□□□□ 0.85
CLDN23Q96B33 KSR1P1-201ENST00000446298 240 ntBASIC20.38■□□□□ 0.85
CLDN23Q96B33 AC104076.2-201ENST00000448912 469 ntBASIC20.38■□□□□ 0.85
CLDN23Q96B33 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 NTF6B-201ENST00000591913 560 ntBASIC20.38■□□□□ 0.85
CLDN23Q96B33 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.38■□□□□ 0.85
CLDN23Q96B33 C1orf229-201ENST00000623686 2258 ntBASIC20.38■□□□□ 0.85
CLDN23Q96B33 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
CLDN23Q96B33 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 TMA16-209ENST00000513272 803 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN23Q96B33 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC20.37■□□□□ 0.85
CLDN23Q96B33 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN23Q96B33 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN23Q96B33 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN23Q96B33 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 C16orf72-201ENST00000327827 5953 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLDN23Q96B33 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 NIFKP9-201ENST00000419265 221 ntBASIC20.35■□□□□ 0.85
CLDN23Q96B33 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN23Q96B33 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN23Q96B33 CR392000.1-201ENST00000624770 1228 ntBASIC20.35■□□□□ 0.85
CLDN23Q96B33 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.35■□□□□ 0.85
CLDN23Q96B33 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC20.35■□□□□ 0.85
CLDN23Q96B33 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN23Q96B33 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 ZNF706-204ENST00000518336 501 ntAPPRIS P1 TSL 4 BASIC20.34■□□□□ 0.85
CLDN23Q96B33 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN23Q96B33 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN23Q96B33 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLDN23Q96B33 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN23Q96B33 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms