Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.82■□□□□ 0.44
USP9XQ93008 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC17.82■□□□□ 0.44
USP9XQ93008 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC17.82■□□□□ 0.44
USP9XQ93008 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP9XQ93008 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.82■□□□□ 0.44
USP9XQ93008 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP9XQ93008 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP9XQ93008 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
USP9XQ93008 NIFKP9-201ENST00000419265 221 ntBASIC17.82■□□□□ 0.44
USP9XQ93008 AP005242.2-201ENST00000580065 1175 ntBASIC17.82■□□□□ 0.44
USP9XQ93008 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
USP9XQ93008 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC17.81■□□□□ 0.44
USP9XQ93008 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
USP9XQ93008 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC17.81■□□□□ 0.44
USP9XQ93008 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP9XQ93008 GCA-201ENST00000233612 1694 ntTSL 2 BASIC17.81■□□□□ 0.44
USP9XQ93008 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.81■□□□□ 0.44
USP9XQ93008 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.81■□□□□ 0.44
USP9XQ93008 PRR31-201ENST00000371629 978 ntTSL 2 BASIC17.81■□□□□ 0.44
USP9XQ93008 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.81■□□□□ 0.44
USP9XQ93008 LINC01238-205ENST00000567549 1107 ntBASIC17.81■□□□□ 0.44
USP9XQ93008 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC17.81■□□□□ 0.44
USP9XQ93008 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP9XQ93008 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC17.81■□□□□ 0.44
USP9XQ93008 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC17.81■□□□□ 0.44
USP9XQ93008 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.81■□□□□ 0.44
USP9XQ93008 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
USP9XQ93008 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
USP9XQ93008 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.8■□□□□ 0.44
USP9XQ93008 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
USP9XQ93008 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC17.8■□□□□ 0.44
USP9XQ93008 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.8■□□□□ 0.44
USP9XQ93008 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.8■□□□□ 0.44
USP9XQ93008 FAM207BP-201ENST00000447172 505 ntBASIC17.8■□□□□ 0.44
USP9XQ93008 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 MESTP1-201ENST00000404287 994 ntBASIC17.8■□□□□ 0.44
USP9XQ93008 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
USP9XQ93008 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
USP9XQ93008 AC116407.4-201ENST00000623319 1061 ntBASIC17.8■□□□□ 0.44
USP9XQ93008 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC17.79■□□□□ 0.44
USP9XQ93008 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
USP9XQ93008 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.79■□□□□ 0.44
USP9XQ93008 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 RNF152P1-201ENST00000397754 604 ntBASIC17.79■□□□□ 0.44
USP9XQ93008 AC010203.1-204ENST00000548782 407 ntBASIC17.79■□□□□ 0.44
USP9XQ93008 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC17.79■□□□□ 0.44
USP9XQ93008 KRT16P1-201ENST00000399124 1418 ntBASIC17.79■□□□□ 0.44
USP9XQ93008 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 TSPY14P-201ENST00000303979 915 ntBASIC17.79■□□□□ 0.44
USP9XQ93008 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
USP9XQ93008 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
USP9XQ93008 YBX1P2-201ENST00000489612 999 ntBASIC17.79■□□□□ 0.44
USP9XQ93008 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
USP9XQ93008 SLC25A1P4-201ENST00000567977 778 ntBASIC17.79■□□□□ 0.44
USP9XQ93008 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.78■□□□□ 0.44
USP9XQ93008 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC17.78■□□□□ 0.44
USP9XQ93008 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.78■□□□□ 0.44
USP9XQ93008 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.78■□□□□ 0.44
USP9XQ93008 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.78■□□□□ 0.44
USP9XQ93008 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
USP9XQ93008 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.78■□□□□ 0.44
USP9XQ93008 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC17.78■□□□□ 0.44
USP9XQ93008 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
USP9XQ93008 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.78■□□□□ 0.44
USP9XQ93008 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
USP9XQ93008 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP9XQ93008 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP9XQ93008 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
USP9XQ93008 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC17.77■□□□□ 0.44
USP9XQ93008 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
USP9XQ93008 LIN28AP1-201ENST00000429574 405 ntBASIC17.77■□□□□ 0.44
USP9XQ93008 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC17.77■□□□□ 0.44
USP9XQ93008 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
USP9XQ93008 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms