Protein–RNA interactions for Protein: Q8WWH5

TRUB1, Probable tRNA pseudouridine synthase 1, humanhuman

Known RBP Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1Q8WWH5 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 MIR4466-201ENST00000606121 54 ntBASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.52■□□□□ 0.56
TRUB1Q8WWH5 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC18.52■□□□□ 0.55
TRUB1Q8WWH5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB1Q8WWH5 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB1Q8WWH5 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRUB1Q8WWH5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.52■□□□□ 0.55
TRUB1Q8WWH5 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 PTMA-205ENST00000410064 814 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 IGHV3-19-201ENST00000521488 291 ntBASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 EEF1DP3-203ENST00000566025 782 ntBASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 AC233992.3-201ENST00000607491 485 ntBASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC18.51■□□□□ 0.55
TRUB1Q8WWH5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 EEF1D-201ENST00000317198 1458 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 AC020916.1-201ENST00000587762 1774 ntBASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRUB1Q8WWH5 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRUB1Q8WWH5 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms