Protein–RNA interactions for Protein: Q8WV48

CCDC107, Coiled-coil domain-containing protein 107, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107Q8WV48 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC107Q8WV48 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
CCDC107Q8WV48 ZGPAT-204ENST00000369967 1890 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
CCDC107Q8WV48 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 HYI-206ENST00000372434 1025 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC17.47■□□□□ 0.39
CCDC107Q8WV48 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 NT5C3AP1-201ENST00000394500 1012 ntBASIC17.46■□□□□ 0.39
CCDC107Q8WV48 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 AC012414.1-201ENST00000556676 535 ntBASIC17.46■□□□□ 0.39
CCDC107Q8WV48 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 MIR6084-201ENST00000622012 110 ntBASIC17.46■□□□□ 0.39
CCDC107Q8WV48 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 AL512408.1-201ENST00000569378 2000 ntBASIC17.46■□□□□ 0.39
CCDC107Q8WV48 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
CCDC107Q8WV48 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.46■□□□□ 0.38
CCDC107Q8WV48 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
CCDC107Q8WV48 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 AC099778.1-201ENST00000568593 1911 ntBASIC17.45■□□□□ 0.38
CCDC107Q8WV48 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
CCDC107Q8WV48 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 BID-203ENST00000399765 1879 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 NME4-202ENST00000382940 766 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 RHOF-204ENST00000537265 699 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 AL354811.1-201ENST00000610286 706 ntBASIC17.44■□□□□ 0.38
CCDC107Q8WV48 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 NME4-211ENST00000620944 1193 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 MCC-208ENST00000514701 2855 ntTSL 2 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
CCDC107Q8WV48 HAND1-201ENST00000231121 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms