Protein–RNA interactions for Protein: Q8NFJ9

BBS1, Bardet-Biedl syndrome 1 protein, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS1Q8NFJ9 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 FOXP4-205ENST00000409208 3341 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
BBS1Q8NFJ9 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 AC120498.10-201ENST00000621827 505 ntBASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.2■□□□□ 0.5
BBS1Q8NFJ9 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 IRS3P-201ENST00000223076 1006 ntBASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BBS1Q8NFJ9 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 HOXC13-201ENST00000243056 2423 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 NABP2-202ENST00000341463 1411 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 AC104187.1-201ENST00000607510 612 ntBASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 DPP3P2-201ENST00000416030 1696 ntBASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.18■□□□□ 0.5
BBS1Q8NFJ9 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC18.17■□□□□ 0.5
BBS1Q8NFJ9 AL691432.2-201ENST00000607222 2038 ntBASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
BBS1Q8NFJ9 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms