Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 SLC25A24-204ENST00000569674 2357 ntBASIC17.72■□□□□ 0.43
CPEB3Q8NE35 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 GCK-205ENST00000437084 1385 ntTSL 5 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 KRT18P68-201ENST00000392293 1000 ntBASIC17.72■□□□□ 0.43
CPEB3Q8NE35 NCF1B-203ENST00000435988 1254 ntBASIC17.72■□□□□ 0.43
CPEB3Q8NE35 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 TK2-208ENST00000545043 1120 ntTSL 2 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 WT1-AS_3.1-201ENST00000613262 234 ntBASIC17.72■□□□□ 0.43
CPEB3Q8NE35 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
CPEB3Q8NE35 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 GORAB-201ENST00000367762 1699 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 B3GALNT1-212ENST00000488170 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 AC020907.5-201ENST00000624372 1936 ntBASIC17.71■□□□□ 0.43
CPEB3Q8NE35 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 PGM5P4-201ENST00000421970 445 ntBASIC17.71■□□□□ 0.43
CPEB3Q8NE35 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 AL121832.2-201ENST00000610979 668 ntBASIC17.71■□□□□ 0.43
CPEB3Q8NE35 GXYLT1P5-201ENST00000614548 1189 ntBASIC17.71■□□□□ 0.43
CPEB3Q8NE35 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 MARS-234ENST00000630571 216 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 MARS-235ENST00000630803 183 ntTSL 3 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.71■□□□□ 0.43
CPEB3Q8NE35 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.42
CPEB3Q8NE35 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC17.71■□□□□ 0.42
CPEB3Q8NE35 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
CPEB3Q8NE35 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 PHB2-213ENST00000546111 858 ntTSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 MKRN4P-201ENST00000444706 1521 ntBASIC17.7■□□□□ 0.42
CPEB3Q8NE35 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CPEB3Q8NE35 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 GABARAPL3-202ENST00000624044 1851 ntBASIC17.69■□□□□ 0.42
CPEB3Q8NE35 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CPEB3Q8NE35 AC092720.2-201ENST00000602388 1665 ntBASIC17.69■□□□□ 0.42
CPEB3Q8NE35 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms