Protein–RNA interactions for Protein: Q8NE22

SETD9, SET domain-containing protein 9, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SETD9Q8NE22 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC18.58■□□□□ 0.56
SETD9Q8NE22 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC18.58■□□□□ 0.56
SETD9Q8NE22 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC18.58■□□□□ 0.56
SETD9Q8NE22 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
SETD9Q8NE22 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.58■□□□□ 0.56
SETD9Q8NE22 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 ITGA6-201ENST00000264107 5618 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
SETD9Q8NE22 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.58■□□□□ 0.56
SETD9Q8NE22 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 AL356740.2-201ENST00000601559 647 ntBASIC18.57■□□□□ 0.56
SETD9Q8NE22 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 MRPL37-202ENST00000360840 1483 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
SETD9Q8NE22 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
SETD9Q8NE22 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 AC120498.9-201ENST00000339021 3867 ntBASIC18.56■□□□□ 0.56
SETD9Q8NE22 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.56■□□□□ 0.56
SETD9Q8NE22 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC18.56■□□□□ 0.56
SETD9Q8NE22 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.56■□□□□ 0.56
SETD9Q8NE22 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.56■□□□□ 0.56
SETD9Q8NE22 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC18.56■□□□□ 0.56
SETD9Q8NE22 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18.56■□□□□ 0.56
SETD9Q8NE22 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
SETD9Q8NE22 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 UNC93B8-201ENST00000511903 705 ntBASIC18.55■□□□□ 0.56
SETD9Q8NE22 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 AC136469.2-201ENST00000623944 1028 ntBASIC18.55■□□□□ 0.56
SETD9Q8NE22 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 AC093484.2-201ENST00000580996 2166 ntBASIC18.55■□□□□ 0.56
SETD9Q8NE22 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.55■□□□□ 0.56
SETD9Q8NE22 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
SETD9Q8NE22 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
SETD9Q8NE22 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
SETD9Q8NE22 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
SETD9Q8NE22 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.53■□□□□ 0.56
SETD9Q8NE22 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
SETD9Q8NE22 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.53■□□□□ 0.56
SETD9Q8NE22 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SETD9Q8NE22 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
SETD9Q8NE22 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms