Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 MEF2B-203ENST00000410050 1429 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 RPLP0-201ENST00000228306 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 IGHV3-33-201ENST00000390615 431 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 IGHV3-30-201ENST00000603660 431 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.82■□□□□ 0.28
C11orf42Q8N5U0 GMPPA-205ENST00000373917 1630 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 ID1-201ENST00000376105 1233 ntBASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 AC104771.1-201ENST00000603335 964 ntBASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 GAMT-205ENST00000640762 751 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
C11orf42Q8N5U0 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 CDK6-202ENST00000424848 1465 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 MCRIP2P1-201ENST00000394346 511 ntBASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 MKRN4P-201ENST00000444706 1521 ntBASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
C11orf42Q8N5U0 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 NIPAL4-202ENST00000435489 1600 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 HLA-L-209ENST00000420110 1011 ntBASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 AL355472.2-201ENST00000422958 438 ntBASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 CYP2T3P-201ENST00000601990 817 ntBASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 AL109923.1-201ENST00000618799 583 ntBASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 MIR2861-201ENST00000636310 90 ntBASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
C11orf42Q8N5U0 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms