Protein–RNA interactions for Protein: Q8N1W1

ARHGEF28, Rho guanine nucleotide exchange factor 28, humanhuman

Known RBP Predictions only

Length 1,705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28Q8N1W1 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 RARRES2P10-201ENST00000564312 460 ntBASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 GRAP-204ENST00000573099 846 ntTSL 3 BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC28.33■■■□□ 2.13
ARHGEF28Q8N1W1 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 AL121829.2-201ENST00000620908 328 ntBASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 GXYLT1P3-201ENST00000453058 1193 ntBASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
ARHGEF28Q8N1W1 FEM1AP4-201ENST00000443167 1987 ntBASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 TK2-204ENST00000525974 1178 ntTSL 2 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
ARHGEF28Q8N1W1 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 PENK-204ENST00000518770 863 ntTSL 2 BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC28.3■■■□□ 2.12
ARHGEF28Q8N1W1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 BX088651.1-201ENST00000540551 451 ntBASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC28.29■■■□□ 2.12
ARHGEF28Q8N1W1 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC28.28■■■□□ 2.12
ARHGEF28Q8N1W1 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 SNX21-213ENST00000614929 587 ntTSL 5 BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC28.27■■■□□ 2.12
ARHGEF28Q8N1W1 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 CABP2-204ENST00000636477 941 ntTSL 5 BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.12
ARHGEF28Q8N1W1 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC28.26■■■□□ 2.11
ARHGEF28Q8N1W1 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms