Protein–RNA interactions for Protein: Q86Y22

COL23A1, Collagen alpha-1(XXIII) chain, humanhuman

Predicted RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL23A1Q86Y22 UPK3BP1-201ENST00000428678 509 ntBASIC25.67■■□□□ 1.7
COL23A1Q86Y22 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
COL23A1Q86Y22 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 AC092384.1-201ENST00000378347 1812 ntTSL 2 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC25.66■■□□□ 1.7
COL23A1Q86Y22 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 AC023632.3-201ENST00000521633 145 ntBASIC25.65■■□□□ 1.7
COL23A1Q86Y22 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 AL358472.4-201ENST00000633140 710 ntBASIC25.65■■□□□ 1.7
COL23A1Q86Y22 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC25.65■■□□□ 1.7
COL23A1Q86Y22 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 EXOC3-AS1-202ENST00000623673 1663 ntBASIC25.64■■□□□ 1.7
COL23A1Q86Y22 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC25.64■■□□□ 1.7
COL23A1Q86Y22 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC25.64■■□□□ 1.69
COL23A1Q86Y22 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
COL23A1Q86Y22 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 KSR1P1-201ENST00000446298 240 ntBASIC25.63■■□□□ 1.69
COL23A1Q86Y22 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 CLN6-221ENST00000637494 765 ntTSL 5 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 CERS5-201ENST00000317551 2051 ntAPPRIS P3 TSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
COL23A1Q86Y22 TCP11-203ENST00000373974 1689 ntAPPRIS ALT2 TSL 2 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.62■■□□□ 1.69
COL23A1Q86Y22 CCNG2-204ENST00000502280 1459 ntAPPRIS P1 TSL 2 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 NIFKP9-201ENST00000419265 221 ntBASIC25.62■■□□□ 1.69
COL23A1Q86Y22 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 AL121906.2-201ENST00000621597 723 ntBASIC25.62■■□□□ 1.69
COL23A1Q86Y22 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC25.62■■□□□ 1.69
COL23A1Q86Y22 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 TOLLIP-AS1-201ENST00000530897 939 ntBASIC25.61■■□□□ 1.69
COL23A1Q86Y22 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 METTL23-204ENST00000586752 904 ntTSL 2 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
COL23A1Q86Y22 SMOX-212ENST00000621355 2322 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
COL23A1Q86Y22 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC25.6■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms