Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.29■□□□□ 0.84
PACS2Q86VP3 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
PACS2Q86VP3 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 AC027682.1-201ENST00000562846 899 ntBASIC20.28■□□□□ 0.84
PACS2Q86VP3 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
PACS2Q86VP3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.28■□□□□ 0.84
PACS2Q86VP3 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 PRSS23-201ENST00000280258 4015 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 AP001330.3-201ENST00000520123 633 ntBASIC20.27■□□□□ 0.84
PACS2Q86VP3 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 AF213884.3-201ENST00000563833 479 ntBASIC20.27■□□□□ 0.84
PACS2Q86VP3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 AC008764.7-201ENST00000593779 1081 ntBASIC20.27■□□□□ 0.84
PACS2Q86VP3 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 AL136967.2-201ENST00000623968 743 ntBASIC20.27■□□□□ 0.84
PACS2Q86VP3 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
PACS2Q86VP3 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.27■□□□□ 0.84
PACS2Q86VP3 SIRT7-201ENST00000328666 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS2Q86VP3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
PACS2Q86VP3 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS2Q86VP3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.27■□□□□ 0.83
PACS2Q86VP3 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
PACS2Q86VP3 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.27■□□□□ 0.83
PACS2Q86VP3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC20.27■□□□□ 0.83
PACS2Q86VP3 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC20.26■□□□□ 0.83
PACS2Q86VP3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.26■□□□□ 0.83
PACS2Q86VP3 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 MIR939-201ENST00000401314 82 ntBASIC20.26■□□□□ 0.83
PACS2Q86VP3 AC091305.1-201ENST00000479476 895 ntBASIC20.26■□□□□ 0.83
PACS2Q86VP3 AC233992.3-201ENST00000607491 485 ntBASIC20.26■□□□□ 0.83
PACS2Q86VP3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.26■□□□□ 0.83
PACS2Q86VP3 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.26■□□□□ 0.83
PACS2Q86VP3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
PACS2Q86VP3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 TCF3P1-201ENST00000423021 1937 ntBASIC20.25■□□□□ 0.83
PACS2Q86VP3 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PACS2Q86VP3 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
PACS2Q86VP3 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
PACS2Q86VP3 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC20.25■□□□□ 0.83
PACS2Q86VP3 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
PACS2Q86VP3 IPO9-AS1-201ENST00000413035 839 ntTSL 3 BASIC20.25■□□□□ 0.83
PACS2Q86VP3 BX842568.3-201ENST00000418104 571 ntBASIC20.25■□□□□ 0.83
PACS2Q86VP3 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.25■□□□□ 0.83
PACS2Q86VP3 CA15P2-201ENST00000611168 834 ntBASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms