Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 AP006621.1-202ENST00000528982 464 ntTSL 2 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 SP2-202ENST00000613139 908 ntTSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC13□□□□□ -0.33
MRPL55Q7Z7F7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 PTPA-214ENST00000423100 988 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 AC092720.2-201ENST00000602388 1665 ntBASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC12.99□□□□□ -0.33
MRPL55Q7Z7F7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 KRT18P14-201ENST00000534205 1250 ntBASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 SLC7A5P2-201ENST00000553010 536 ntBASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 CACNA1A-258ENST00000638029 7814 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
MRPL55Q7Z7F7 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
MRPL55Q7Z7F7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC12.97□□□□□ -0.33
MRPL55Q7Z7F7 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms