Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 FADS6-203ENST00000612771 2154 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 SCOC-207ENST00000506597 1838 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 APTR-205ENST00000447009 902 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
TTC39BQ5VTQ0 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 AL355472.2-201ENST00000422958 438 ntBASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 DENND3-207ENST00000518347 850 ntTSL 2 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 AC121338.2-201ENST00000622535 1744 ntBASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
TTC39BQ5VTQ0 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 KRT17P1-201ENST00000399211 1546 ntBASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 STAC-204ENST00000457375 1366 ntTSL 2 BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.96
TTC39BQ5VTQ0 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 PDXDC2P-202ENST00000527016 543 ntTSL 3 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 AC098934.4-201ENST00000564127 592 ntBASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 AC105020.6-201ENST00000621523 1217 ntBASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 ARRB2-202ENST00000346341 1769 ntTSL 2 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
TTC39BQ5VTQ0 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 DUSP5P2-201ENST00000426873 1033 ntBASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 HES2-205ENST00000487437 968 ntTSL 3 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 AC091874.3-201ENST00000512672 1195 ntBASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 GABARAPL3-202ENST00000624044 1851 ntBASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
TTC39BQ5VTQ0 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 AC092667.1-201ENST00000434301 2586 ntBASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 RHEB-204ENST00000472642 900 ntTSL 3 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 AC097658.1-201ENST00000475555 843 ntBASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 MYC-209ENST00000641252 345 ntBASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
TTC39BQ5VTQ0 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms