Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.8■□□□□ 0.44
NKX6-1P78426 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NKX6-1P78426 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 AC007322.3-201ENST00000426526 701 ntBASIC17.8■□□□□ 0.44
NKX6-1P78426 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
NKX6-1P78426 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 WDR88-201ENST00000355868 1718 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
NKX6-1P78426 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.8■□□□□ 0.44
NKX6-1P78426 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
NKX6-1P78426 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
NKX6-1P78426 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NKX6-1P78426 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC17.79■□□□□ 0.44
NKX6-1P78426 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-1P78426 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-1P78426 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC17.79■□□□□ 0.44
NKX6-1P78426 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 EXOC3-AS1-202ENST00000623673 1663 ntBASIC17.79■□□□□ 0.44
NKX6-1P78426 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
NKX6-1P78426 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-1P78426 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC17.79■□□□□ 0.44
NKX6-1P78426 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 RASGRP2-210ENST00000394430 2174 ntTSL 2 BASIC17.79■□□□□ 0.44
NKX6-1P78426 AC116050.2-201ENST00000612102 1779 ntBASIC17.79■□□□□ 0.44
NKX6-1P78426 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
NKX6-1P78426 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NKX6-1P78426 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX6-1P78426 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.78■□□□□ 0.44
NKX6-1P78426 PAX1-202ENST00000444366 1850 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
NKX6-1P78426 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 MIR718-201ENST00000390190 70 ntBASIC17.78■□□□□ 0.44
NKX6-1P78426 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.78■□□□□ 0.44
NKX6-1P78426 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX6-1P78426 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NKX6-1P78426 RHOD-202ENST00000532559 538 ntTSL 3 BASIC17.78■□□□□ 0.44
NKX6-1P78426 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.78■□□□□ 0.44
NKX6-1P78426 SHOX2-203ENST00000441443 3038 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
NKX6-1P78426 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
NKX6-1P78426 LAG3-202ENST00000441671 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC17.78■□□□□ 0.44
NKX6-1P78426 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
NKX6-1P78426 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NKX6-1P78426 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
NKX6-1P78426 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NKX6-1P78426 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX6-1P78426 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-1P78426 IVD-206ENST00000487418 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-1P78426 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC17.77■□□□□ 0.44
NKX6-1P78426 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-1P78426 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.77■□□□□ 0.44
NKX6-1P78426 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-1P78426 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
NKX6-1P78426 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
NKX6-1P78426 VMO1-204ENST00000441199 741 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX6-1P78426 ALG5-202ENST00000443765 1119 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX6-1P78426 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.77■□□□□ 0.44
NKX6-1P78426 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC17.77■□□□□ 0.44
NKX6-1P78426 AC100791.3-201ENST00000617619 330 ntBASIC17.77■□□□□ 0.44
NKX6-1P78426 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC17.77■□□□□ 0.44
NKX6-1P78426 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC17.77■□□□□ 0.43
NKX6-1P78426 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
NKX6-1P78426 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
NKX6-1P78426 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 FAM20C-201ENST00000313766 2751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
NKX6-1P78426 KCNK15-201ENST00000372861 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
NKX6-1P78426 DUSP15-205ENST00000398084 1256 ntTSL 5 BASIC17.76■□□□□ 0.43
NKX6-1P78426 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms