Protein–RNA interactions for Protein: P56749

CLDN12, Claudin-12, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN12P56749 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC17.59■□□□□ 0.41
CLDN12P56749 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 BAG4-202ENST00000432471 1943 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN12P56749 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC17.58■□□□□ 0.41
CLDN12P56749 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN12P56749 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN12P56749 STX6-204ENST00000542060 4809 ntTSL 2 BASIC17.58■□□□□ 0.41
CLDN12P56749 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN12P56749 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
CLDN12P56749 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CLDN12P56749 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN12P56749 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC17.58■□□□□ 0.4
CLDN12P56749 AICDA-202ENST00000537228 667 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN12P56749 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC17.58■□□□□ 0.4
CLDN12P56749 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.58■□□□□ 0.4
CLDN12P56749 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC17.58■□□□□ 0.4
CLDN12P56749 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CLDN12P56749 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CLDN12P56749 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN12P56749 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN12P56749 TSPY26P-201ENST00000476365 1326 ntBASIC17.57■□□□□ 0.4
CLDN12P56749 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 AC024257.2-201ENST00000549699 147 ntBASIC17.57■□□□□ 0.4
CLDN12P56749 AC008764.7-201ENST00000593779 1081 ntBASIC17.57■□□□□ 0.4
CLDN12P56749 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC17.57■□□□□ 0.4
CLDN12P56749 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 BX323043.1-201ENST00000641006 1765 ntBASIC17.57■□□□□ 0.4
CLDN12P56749 AC004408.2-201ENST00000623613 2777 ntBASIC17.57■□□□□ 0.4
CLDN12P56749 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CLDN12P56749 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CLDN12P56749 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN12P56749 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 AIRN-201ENST00000601203 4374 ntBASIC17.56■□□□□ 0.4
CLDN12P56749 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 AL136116.3-201ENST00000402907 1138 ntBASIC17.56■□□□□ 0.4
CLDN12P56749 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 MFF-208ENST00000409616 1247 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN12P56749 AC055876.1-201ENST00000430589 895 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN12P56749 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN12P56749 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.56■□□□□ 0.4
CLDN12P56749 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC17.56■□□□□ 0.4
CLDN12P56749 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC17.56■□□□□ 0.4
CLDN12P56749 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
CLDN12P56749 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CLDN12P56749 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 MAP4K4-204ENST00000350198 7316 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN12P56749 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC17.55■□□□□ 0.4
CLDN12P56749 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 MFF-207ENST00000409565 1548 ntTSL 2 BASIC17.55■□□□□ 0.4
CLDN12P56749 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 ETV7-203ENST00000373737 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC17.55■□□□□ 0.4
CLDN12P56749 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLDN12P56749 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC17.54■□□□□ 0.4
CLDN12P56749 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLDN12P56749 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms