Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC14.87□□□□□ -0.03
APOC4P55056 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
APOC4P55056 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 ARHGEF25-201ENST00000286494 2552 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
APOC4P55056 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC4P55056 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
APOC4P55056 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC14.86□□□□□ -0.03
APOC4P55056 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
APOC4P55056 LRRC25-202ENST00000595840 1924 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC14.86□□□□□ -0.03
APOC4P55056 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
APOC4P55056 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APOC4P55056 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC14.85□□□□□ -0.03
APOC4P55056 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
APOC4P55056 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC14.85□□□□□ -0.03
APOC4P55056 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APOC4P55056 AC128676.1-201ENST00000454392 318 ntBASIC14.85□□□□□ -0.03
APOC4P55056 ABHD17AP6-201ENST00000458502 1044 ntBASIC14.85□□□□□ -0.03
APOC4P55056 ZNF688-205ENST00000563707 244 ntTSL 3 BASIC14.85□□□□□ -0.03
APOC4P55056 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC14.85□□□□□ -0.03
APOC4P55056 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC14.85□□□□□ -0.03
APOC4P55056 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC14.85□□□□□ -0.03
APOC4P55056 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
APOC4P55056 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
APOC4P55056 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
APOC4P55056 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
APOC4P55056 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 KRT8P36-201ENST00000489121 1440 ntBASIC14.84□□□□□ -0.03
APOC4P55056 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 RNPEP-201ENST00000295640 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC14.84□□□□□ -0.03
APOC4P55056 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 FEM1AP4-201ENST00000443167 1987 ntBASIC14.84□□□□□ -0.03
APOC4P55056 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
APOC4P55056 RER1-204ENST00000378518 522 ntTSL 3 BASIC14.84□□□□□ -0.03
APOC4P55056 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC14.84□□□□□ -0.03
APOC4P55056 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC14.84□□□□□ -0.03
APOC4P55056 AC093323.1-201ENST00000307533 2311 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC14.84□□□□□ -0.03
APOC4P55056 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
APOC4P55056 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC4P55056 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC4P55056 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC4P55056 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
APOC4P55056 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC14.83□□□□□ -0.04
APOC4P55056 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
APOC4P55056 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 ZDHHC20-204ENST00000415724 1296 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
APOC4P55056 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC14.83□□□□□ -0.04
APOC4P55056 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
APOC4P55056 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
APOC4P55056 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
APOC4P55056 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC14.83□□□□□ -0.04
APOC4P55056 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC14.83□□□□□ -0.04
APOC4P55056 AP006294.2-201ENST00000641667 209 ntBASIC14.83□□□□□ -0.04
APOC4P55056 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
APOC4P55056 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
APOC4P55056 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC14.83□□□□□ -0.04
APOC4P55056 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 90.5 ms