Protein–RNA interactions for Protein: P53973

HDA1, Histone deacetylase HDA1, yeastyeast

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HDA1P53973 SOK2YMR016C 2358 nt2.8□□□□□ -1.96
HDA1P53973 STE11YLR362W 2154 nt2.8□□□□□ -1.96
HDA1P53973 MOT1YPL082C 5604 nt2.8□□□□□ -1.96
HDA1P53973 YEL020C-BYEL020C-B 198 nt2.8□□□□□ -1.96
HDA1P53973 PRP6YBR055C 2700 nt2.8□□□□□ -1.96
HDA1P53973 RRP12YPL012W 3687 nt2.8□□□□□ -1.96
HDA1P53973 ESL2YKR096W 3588 nt2.8□□□□□ -1.96
HDA1P53973 ALK2YBL009W 2031 nt2.8□□□□□ -1.96
HDA1P53973 BPT1YLL015W 4680 nt2.8□□□□□ -1.96
HDA1P53973 ECM29YHL030W 5607 nt2.79□□□□□ -1.96
HDA1P53973 MCD1YDL003W 1701 nt2.79□□□□□ -1.96
HDA1P53973 DUG2YBR281C 2637 nt2.79□□□□□ -1.96
HDA1P53973 MSB1YOR188W 3414 nt2.79□□□□□ -1.96
HDA1P53973 TOF2YKR010C 2316 nt2.79□□□□□ -1.96
HDA1P53973 YGL041CYGL041C 204 nt2.79□□□□□ -1.96
HDA1P53973 YNL198CYNL198C 303 nt2.79□□□□□ -1.96
HDA1P53973 FKS3YMR306W 5358 nt2.79□□□□□ -1.96
HDA1P53973 COG8YML071C 1824 nt2.79□□□□□ -1.96
HDA1P53973 GCV2YMR189W 3105 nt2.79□□□□□ -1.96
HDA1P53973 SRO77YBL106C 3033 nt2.79□□□□□ -1.96
HDA1P53973 SLH1YGR271W 5904 nt2.78□□□□□ -1.96
HDA1P53973 PHO91YNR013C 2685 nt2.78□□□□□ -1.96
HDA1P53973 MMS1YPR164W 4224 nt2.78□□□□□ -1.96
HDA1P53973 FMP16YDR070C 282 nt2.78□□□□□ -1.96
HDA1P53973 FPR1YNL135C 345 nt2.78□□□□□ -1.96
HDA1P53973 SNC2YOR327C 348 nt2.78□□□□□ -1.96
HDA1P53973 VMA9YCL005W-A 222 nt2.78□□□□□ -1.96
HDA1P53973 ARP8YOR141C 2646 nt2.78□□□□□ -1.96
HDA1P53973 PAN3YKL025C 2040 nt2.78□□□□□ -1.96
HDA1P53973 GEA1YJR031C 4227 nt2.78□□□□□ -1.96
HDA1P53973 YGL069CYGL069C 465 nt2.77□□□□□ -1.97
HDA1P53973 HHT1YBR010W 411 nt2.77□□□□□ -1.97
HDA1P53973 DYN1YKR054C 12279 nt2.77□□□□□ -1.97
HDA1P53973 RPO41YFL036W 4056 nt2.77□□□□□ -1.97
HDA1P53973 YDR098C-BYDR098C-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YDR210C-DYDR210C-D 5268 nt2.77□□□□□ -1.97
HDA1P53973 YDR316W-BYDR316W-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YDR365W-BYDR365W-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YER138CYER138C 5268 nt2.77□□□□□ -1.97
HDA1P53973 YER160CYER160C 5268 nt2.77□□□□□ -1.97
HDA1P53973 YGR038C-BYGR038C-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YGR161C-DYGR161C-D 5268 nt2.77□□□□□ -1.97
HDA1P53973 YJR027WYJR027W 5268 nt2.77□□□□□ -1.97
HDA1P53973 YLR157C-BYLR157C-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YML039WYML039W 5268 nt2.77□□□□□ -1.97
HDA1P53973 YML045WYML045W 5268 nt2.77□□□□□ -1.97
HDA1P53973 YMR050CYMR050C 5268 nt2.77□□□□□ -1.97
HDA1P53973 YOL103W-BYOL103W-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YBR012W-BYBR012W-B 5271 nt2.77□□□□□ -1.97
HDA1P53973 YOR142W-BYOR142W-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YPL257W-BYPL257W-B 5268 nt2.77□□□□□ -1.97
HDA1P53973 YPR158W-BYPR158W-B 5271 nt2.77□□□□□ -1.97
HDA1P53973 PFF1YBR074W 2931 nt2.76□□□□□ -1.97
HDA1P53973 YCK3YER123W 1575 nt2.76□□□□□ -1.97
HDA1P53973 TOM1YDR457W 9807 nt2.76□□□□□ -1.97
HDA1P53973 RPL38YLR325C 237 nt2.76□□□□□ -1.97
HDA1P53973 HDA3YPR179C 1968 nt2.76□□□□□ -1.97
HDA1P53973 KEL2YGR238C 2649 nt2.75□□□□□ -1.97
HDA1P53973 BUD4YJR092W 4344 nt2.75□□□□□ -1.97
HDA1P53973 VPS35YJL154C 2835 nt2.75□□□□□ -1.97
HDA1P53973 NPC2YDL046W 522 nt2.75□□□□□ -1.97
HDA1P53973 PCC1YKR095W-A 267 nt2.75□□□□□ -1.97
HDA1P53973 YBR064WYBR064W 429 nt2.75□□□□□ -1.97
HDA1P53973 VTC3YPL019C 2508 nt2.75□□□□□ -1.97
HDA1P53973 NUP120YKL057C 3114 nt2.75□□□□□ -1.97
HDA1P53973 TMN3YER113C 2121 nt2.74□□□□□ -1.97
HDA1P53973 HRD3YLR207W 2502 nt2.74□□□□□ -1.97
HDA1P53973 UTP14YML093W 2700 nt2.74□□□□□ -1.97
HDA1P53973 YHR086W-AYHR086W-A 162 nt2.74□□□□□ -1.97
HDA1P53973 CRS5YOR031W 210 nt2.74□□□□□ -1.97
HDA1P53973 FIR1YER032W 2631 nt2.73□□□□□ -1.97
HDA1P53973 CAF120YNL278W 3183 nt2.73□□□□□ -1.97
HDA1P53973 snR55snR55 98 nt2.73□□□□□ -1.97
HDA1P53973 YPR063CYPR063C 423 nt2.73□□□□□ -1.97
HDA1P53973 SGS1YMR190C 4344 nt2.73□□□□□ -1.97
HDA1P53973 BFA1YJR053W 1725 nt2.73□□□□□ -1.97
HDA1P53973 MET6YER091C 2304 nt2.73□□□□□ -1.97
HDA1P53973 UBP1YDL122W 2430 nt2.72□□□□□ -1.97
HDA1P53973 snR60snR60 104 nt2.72□□□□□ -1.97
HDA1P53973 ISD11YER048W-A 285 nt2.72□□□□□ -1.97
HDA1P53973 APQ12YIL040W 417 nt2.72□□□□□ -1.97
HDA1P53973 SCP160YJL080C 3669 nt2.72□□□□□ -1.97
HDA1P53973 YML007C-AYML007C-A 111 nt2.72□□□□□ -1.97
HDA1P53973 PEX8YGR077C 1770 nt2.72□□□□□ -1.97
HDA1P53973 SNF5YBR289W 2718 nt2.71□□□□□ -1.98
HDA1P53973 KAP123YER110C 3342 nt2.71□□□□□ -1.98
HDA1P53973 BNR1YIL159W 4128 nt2.71□□□□□ -1.98
HDA1P53973 SMD1YGR074W 441 nt2.71□□□□□ -1.98
HDA1P53973 RPA34YJL148W 702 nt2.71□□□□□ -1.98
HDA1P53973 YJL197C-AYJL197C-A 282 nt2.71□□□□□ -1.98
HDA1P53973 IES4YOR189W 351 nt2.71□□□□□ -1.98
HDA1P53973 YCL023CYCL023C 348 nt2.71□□□□□ -1.98
HDA1P53973 VPH1YOR270C 2523 nt2.71□□□□□ -1.98
HDA1P53973 SMY1YKL079W 1971 nt2.7□□□□□ -1.98
HDA1P53973 YGR250CYGR250C 2346 nt2.7□□□□□ -1.98
HDA1P53973 TAE2YPL009C 3117 nt2.7□□□□□ -1.98
HDA1P53973 YDR426CYDR426C 378 nt2.7□□□□□ -1.98
HDA1P53973 CYB5YNL111C 363 nt2.7□□□□□ -1.98
HDA1P53973 YBR224WYBR224W 516 nt2.7□□□□□ -1.98
HDA1P53973 MRD1YPR112C 2664 nt2.7□□□□□ -1.98
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms