Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 BIRC5-202ENST00000350051 2630 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.321e-6■□□□□ 10.7
CSTF2P33240 BIRC5-201ENST00000301633 2711 ntTSL 1 (best) BASIC12.87□□□□□ -0.351e-6■□□□□ 10.7
CSTF2P33240 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.451e-6■□□□□ 10.7
CSTF2P33240 GCC2-201ENST00000309863 7537 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.621e-6■□□□□ 10.7
CSTF2P33240 BET1-202ENST00000357520 3586 ntTSL 1 (best)6.4□□□□□ -1.391e-6■□□□□ 10.7
CSTF2P33240 GCC2-211ENST00000482325 6772 ntTSL 1 (best)5.25□□□□□ -1.571e-6■□□□□ 10.7
CSTF2P33240 BET1-207ENST00000471446 535 ntTSL 32.63□□□□□ -1.991e-6■□□□□ 10.7
CSTF2P33240 AC004980.1-202ENST00000450661 962 ntTSL 1 (best)23.63■■□□□ 1.372e-6■□□□□ 10.6
CSTF2P33240 AC004980.1-203ENST00000423084 748 ntTSL 322.64■■□□□ 1.212e-6■□□□□ 10.6
CSTF2P33240 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.69■□□□□ 0.92e-6■□□□□ 10.6
CSTF2P33240 RBM39-233ENST00000482563 1737 ntTSL 26.53□□□□□ -1.361e-12■□□□□ 10.6
CSTF2P33240 RBM39-235ENST00000490354 436 ntTSL 24.19□□□□□ -1.741e-12■□□□□ 10.6
CSTF2P33240 RBM39-241ENST00000496183 632 ntTSL 23.99□□□□□ -1.771e-12■□□□□ 10.6
CSTF2P33240 PROX1-204ENST00000471129 900 ntTSL 316.93■□□□□ 0.33e-6■□□□□ 10.6
CSTF2P33240 PROX1-206ENST00000607425 560 ntTSL 310.37□□□□□ -0.753e-6■□□□□ 10.6
CSTF2P33240 PROX1-201ENST00000261454 8170 ntAPPRIS P1 TSL 1 (best) BASIC7.89□□□□□ -1.153e-6■□□□□ 10.6
CSTF2P33240 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.223e-6■□□□□ 10.6
CSTF2P33240 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.273e-6■□□□□ 10.6
CSTF2P33240 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.533e-6■□□□□ 10.6
CSTF2P33240 HMGB3-204ENST00000448905 812 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.283e-6■□□□□ 10.6
CSTF2P33240 HMGB3-201ENST00000325307 3560 ntAPPRIS P2 TSL 1 (best) BASIC9.48□□□□□ -0.893e-6■□□□□ 10.6
CSTF2P33240 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC7.9□□□□□ -1.143e-6■□□□□ 10.6
CSTF2P33240 SEC23IP-203ENST00000446561 582 ntTSL 37.21□□□□□ -1.263e-6■□□□□ 10.6
CSTF2P33240 SEC23IP-208ENST00000543134 1461 ntTSL 5 BASIC6.68□□□□□ -1.343e-6■□□□□ 10.6
CSTF2P33240 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.751e-6■□□□□ 10.6
CSTF2P33240 MAPK8-210ENST00000432379 907 ntTSL 317.34■□□□□ 0.371e-6■□□□□ 10.6
CSTF2P33240 MAPK8-208ENST00000426557 860 ntTSL 414.31□□□□□ -0.121e-6■□□□□ 10.6
CSTF2P33240 ZNF652-203ENST00000508237 4543 ntTSL 212.41□□□□□ -0.421e-6■□□□□ 10.6
CSTF2P33240 MAPK8-207ENST00000395611 5844 ntAPPRIS ALT1 TSL 2 BASIC10.5□□□□□ -0.731e-6■□□□□ 10.6
CSTF2P33240 MAPK8-209ENST00000429041 603 ntTSL 510.39□□□□□ -0.751e-6■□□□□ 10.6
CSTF2P33240 MAPK8-206ENST00000374189 5796 ntAPPRIS ALT1 TSL 5 BASIC9.99□□□□□ -0.811e-6■□□□□ 10.6
CSTF2P33240 ZNF652-201ENST00000362063 5988 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.311e-6■□□□□ 10.6
CSTF2P33240 MAPK8-215ENST00000476134 732 ntTSL 34.2□□□□□ -1.741e-6■□□□□ 10.6
CSTF2P33240 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC14.03□□□□□ -0.161e-6■□□□□ 10.6
CSTF2P33240 SLIRP-211ENST00000557623 865 ntTSL 2 BASIC12.19□□□□□ -0.461e-6■□□□□ 10.6
CSTF2P33240 SLIRP-205ENST00000556310 626 ntTSL 211.27□□□□□ -0.611e-6■□□□□ 10.6
CSTF2P33240 SLIRP-206ENST00000556375 408 ntTSL 211.27□□□□□ -0.611e-6■□□□□ 10.6
CSTF2P33240 NHSL1-207ENST00000491526 506 ntAPPRIS ALT2 TSL 313.55□□□□□ -0.241e-6■□□□□ 10.6
CSTF2P33240 NHSL1-204ENST00000427025 7500 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.381e-6■□□□□ 10.6
CSTF2P33240 GPT2-204ENST00000562801 2092 ntTSL 214.13□□□□□ -0.156e-10■□□□□ 10.5
CSTF2P33240 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.245e-7■□□□□ 10.5
CSTF2P33240 GPT2-202ENST00000440783 4228 ntTSL 2 BASIC11.81□□□□□ -0.525e-7■□□□□ 10.5
CSTF2P33240 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.99□□□□□ -1.456e-9■□□□□ 10.5
CSTF2P33240 RFC3-203ENST00000616236 612 ntTSL 34.62□□□□□ -1.676e-9■□□□□ 10.5
CSTF2P33240 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.692e-6■□□□□ 10.5
CSTF2P33240 GAS2-205ENST00000528582 736 ntTSL 317.19■□□□□ 0.342e-6■□□□□ 10.5
CSTF2P33240 GAS2-203ENST00000524701 2241 ntTSL 27.76□□□□□ -1.172e-6■□□□□ 10.5
CSTF2P33240 GAS2-210ENST00000630668 674 ntTSL 5 BASIC7.48□□□□□ -1.212e-6■□□□□ 10.5
CSTF2P33240 GAS2-201ENST00000278187 2170 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.332e-6■□□□□ 10.5
CSTF2P33240 GAS2-206ENST00000532398 712 ntTSL 35.45□□□□□ -1.542e-6■□□□□ 10.5
CSTF2P33240 GAS2-209ENST00000534801 579 ntTSL 34.32□□□□□ -1.722e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-203ENST00000461304 2024 ntTSL 1 (best)21.11■□□□□ 0.971e-6■□□□□ 10.5
CSTF2P33240 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.45■□□□□ 0.71e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.31e-6■□□□□ 10.5
CSTF2P33240 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.281e-6■□□□□ 10.5
CSTF2P33240 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.111e-6■□□□□ 10.5
CSTF2P33240 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC14.61□□□□□ -0.071e-6■□□□□ 10.5
CSTF2P33240 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.191e-6■□□□□ 10.5
CSTF2P33240 CBX3-201ENST00000337620 2128 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.21e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-204ENST00000494633 3820 ntTSL 213.11□□□□□ -0.311e-6■□□□□ 10.5
CSTF2P33240 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.61□□□□□ -0.391e-6■□□□□ 10.5
CSTF2P33240 GPT2-205ENST00000569193 3205 ntTSL 1 (best)12.24□□□□□ -0.451e-6■□□□□ 10.5
CSTF2P33240 TBCA-202ENST00000380377 683 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.621e-6■□□□□ 10.5
CSTF2P33240 TBC1D20-202ENST00000461188 5195 ntTSL 29.82□□□□□ -0.841e-6■□□□□ 10.5
CSTF2P33240 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.841e-6■□□□□ 10.5
CSTF2P33240 TBCA-208ENST00000520361 446 ntTSL 2 BASIC9.15□□□□□ -0.941e-6■□□□□ 10.5
CSTF2P33240 TBCA-201ENST00000306388 2301 ntTSL 2 BASIC8.68□□□□□ -1.021e-6■□□□□ 10.5
CSTF2P33240 CBX3-206ENST00000481057 860 ntTSL 26.56□□□□□ -1.361e-6■□□□□ 10.5
CSTF2P33240 TBCA-209ENST00000522370 435 ntTSL 3 BASIC6.26□□□□□ -1.411e-6■□□□□ 10.5
CSTF2P33240 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC5.35□□□□□ -1.551e-6■□□□□ 10.5
CSTF2P33240 FNIP1-202ENST00000307968 6388 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.571e-6■□□□□ 10.5
CSTF2P33240 TBCA-207ENST00000520039 157 ntTSL 3 BASIC4.92□□□□□ -1.621e-6■□□□□ 10.5
CSTF2P33240 TBCA-206ENST00000518338 551 ntTSL 2 BASIC3.46□□□□□ -1.861e-6■□□□□ 10.5
CSTF2P33240 COMMD10-201ENST00000274458 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.393e-6■□□□□ 10.4
CSTF2P33240 COMMD10-207ENST00000632434 1433 ntTSL 1 (best) BASIC12.07□□□□□ -0.483e-6■□□□□ 10.4
CSTF2P33240 COMMD10-204ENST00000507356 870 ntTSL 311.74□□□□□ -0.533e-6■□□□□ 10.4
CSTF2P33240 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC4.52□□□□□ -1.693e-6■□□□□ 10.4
CSTF2P33240 COMMD10-203ENST00000506589 793 ntTSL 52.14□□□□□ -2.073e-6■□□□□ 10.4
CSTF2P33240 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.064e-6■□□□□ 10.4
CSTF2P33240 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC12.42□□□□□ -0.424e-6■□□□□ 10.4
CSTF2P33240 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.985e-11■□□□□ 10.4
CSTF2P33240 RPL13-210ENST00000562879 958 ntTSL 1 (best)14.88□□□□□ -0.035e-11■□□□□ 10.4
CSTF2P33240 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC13.97□□□□□ -0.175e-11■□□□□ 10.4
CSTF2P33240 RPL13-201ENST00000311528 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.545e-11■□□□□ 10.4
CSTF2P33240 RPL13-206ENST00000472354 631 ntTSL 310.73□□□□□ -0.695e-11■□□□□ 10.4
CSTF2P33240 C9orf3-222ENST00000496567 1575 ntTSL 520.89■□□□□ 0.949e-7■□□□□ 10.4
CSTF2P33240 CHD9-208ENST00000563410 488 ntTSL 220.77■□□□□ 0.922e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-216ENST00000471948 2119 ntTSL 220.57■□□□□ 0.884e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.874e-6■□□□□ 10.4
CSTF2P33240 HPN-208ENST00000600390 564 ntTSL 418.79■□□□□ 0.65e-12■□□□□ 10.4
CSTF2P33240 SH3YL1-213ENST00000463865 1999 ntTSL 517.96■□□□□ 0.474e-6■□□□□ 10.4
CSTF2P33240 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.182e-6■□□□□ 10.4
CSTF2P33240 HPN-205ENST00000596662 584 ntTSL 415.72■□□□□ 0.115e-12■□□□□ 10.4
CSTF2P33240 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.064e-6■□□□□ 10.4
CSTF2P33240 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.68□□□□□ -0.062e-6■□□□□ 10.4
CSTF2P33240 A1CF-203ENST00000373995 2211 ntTSL 2 BASIC12.6□□□□□ -0.392e-6■□□□□ 10.4
CSTF2P33240 A1CF-204ENST00000373997 2116 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.422e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-209ENST00000451005 782 ntTSL 512.02□□□□□ -0.494e-6■□□□□ 10.4
CSTF2P33240 SH3YL1-204ENST00000403658 1279 ntTSL 2 BASIC11.41□□□□□ -0.584e-6■□□□□ 10.4
CSTF2P33240 A1CF-208ENST00000414883 885 ntTSL 510.67□□□□□ -0.72e-6■□□□□ 10.4
Retrieved 100 of 6,735 protein–RNA pairs in 256.5 ms