RNA–Protein interactions for RNA: ENST00000446561.1

SEC23IP-203, Transcript of SEC23 interacting protein, humanhuman

TSL 3

Gene SEC23IP, Length 582 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23IP-203ENST00000446561 NISCHQ9Y2I1 1504 aa14.9□□□□□ -0.02
SEC23IP-203ENST00000446561 AEBP2Q6ZN18 517 aaPredicted RBP14.82□□□□□ -0.04
SEC23IP-203ENST00000446561 CHIC1Q5VXU3 224 aa14.81□□□□□ -0.04
SEC23IP-203ENST00000446561 PHF23Q9BUL5 403 aaPredicted RBP13.13□□□□□ -0.31
SEC23IP-203ENST00000446561 CCDC180Q9P1Z9 1646 aa12.79□□□□□ -0.36
SEC23IP-203ENST00000446561 ZCCHC6Q5VYS8 1495 aaKnown RBP12.67□□□□□ -0.38
SEC23IP-203ENST00000446561 SHROOM4Q9ULL8 1493 aa12.57□□□□□ -0.4
SEC23IP-203ENST00000446561 SUPT5HO00267 1087 aaKnown RBP12.46□□□□□ -0.41
SEC23IP-203ENST00000446561 SENP3Q9H4L4 574 aaPredicted RBP12.41□□□□□ -0.42
SEC23IP-203ENST00000446561 DCAF1Q9Y4B6 1507 aa12.38□□□□□ -0.43
SEC23IP-203ENST00000446561 HRCP23327 699 aa12.37□□□□□ -0.43
SEC23IP-203ENST00000446561 MYO15BQ96JP2 1530 aa12.27□□□□□ -0.44
SEC23IP-203ENST00000446561 PLPPR3Q6T4P5 718 aa12.17□□□□□ -0.46
SEC23IP-203ENST00000446561 PCGF6Q9BYE7 350 aa12.08□□□□□ -0.48
SEC23IP-203ENST00000446561 ABCC9O60706 1549 aa12.04□□□□□ -0.48
SEC23IP-203ENST00000446561 DCAF8L2P0C7V8 631 aa11.99□□□□□ -0.49
SEC23IP-203ENST00000446561 ZEB1P37275 1124 aaPredicted RBP11.98□□□□□ -0.49
SEC23IP-203ENST00000446561 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
SEC23IP-203ENST00000446561 PELP1Q8IZL8 1130 aaKnown RBP11.86□□□□□ -0.51
SEC23IP-203ENST00000446561 RB1CC1Q8TDY2 1594 aa11.84□□□□□ -0.51
SEC23IP-203ENST00000446561 PPARGC1BQ86YN6 1023 aaKnown RBP11.83□□□□□ -0.52
SEC23IP-203ENST00000446561 LOC105371045A0A1W2PR82 267 aa11.81□□□□□ -0.52
SEC23IP-203ENST00000446561 RSF1Q96T23 1441 aaPredicted RBP11.79□□□□□ -0.52
SEC23IP-203ENST00000446561 SCRIBQ14160 1630 aa11.76□□□□□ -0.53
SEC23IP-203ENST00000446561 TRIM41Q8WV44 630 aa11.71□□□□□ -0.53
SEC23IP-203ENST00000446561 NACADO15069 1562 aa11.7□□□□□ -0.54
SEC23IP-203ENST00000446561 BAZ1AQ9NRL2 1556 aaPredicted RBP11.58□□□□□ -0.56
SEC23IP-203ENST00000446561 FOXD1Q16676 465 aa11.54□□□□□ -0.56
SEC23IP-203ENST00000446561 EIF4G1Q04637 1599 aaKnown RBP11.52□□□□□ -0.57
SEC23IP-203ENST00000446561 MROH2BQ7Z745 1585 aa11.5□□□□□ -0.57
SEC23IP-203ENST00000446561 ADRA2BP18089 450 aa11.49□□□□□ -0.57
SEC23IP-203ENST00000446561 WIZO95785 1651 aa11.49□□□□□ -0.57
SEC23IP-203ENST00000446561 PPP6R1Q9UPN7 881 aa11.47□□□□□ -0.57
SEC23IP-203ENST00000446561 WRNQ14191 1432 aaPredicted RBP eCLIP11.45□□□□□ -0.58
SEC23IP-203ENST00000446561 MYT1Q01538 1121 aa11.45□□□□□ -0.58
SEC23IP-203ENST00000446561 FAM9AQ8IZU1 332 aaPredicted RBP11.45□□□□□ -0.58
SEC23IP-203ENST00000446561 CECR2Q9BXF3 1484 aa11.44□□□□□ -0.58
SEC23IP-203ENST00000446561 SCAF1Q9H7N4 1312 aaKnown RBP11.43□□□□□ -0.58
SEC23IP-203ENST00000446561 TOP2AP11388 1531 aaKnown RBP11.43□□□□□ -0.58
SEC23IP-203ENST00000446561 EEA1Q15075 1411 aa11.43□□□□□ -0.58
SEC23IP-203ENST00000446561 CENPBP07199 599 aaPredicted RBP11.4□□□□□ -0.58
SEC23IP-203ENST00000446561 CCER1Q8TC90 406 aaPredicted RBP11.37□□□□□ -0.59
SEC23IP-203ENST00000446561 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
SEC23IP-203ENST00000446561 SMARCA4P51532 1647 aa11.35□□□□□ -0.59
SEC23IP-203ENST00000446561 TNIKQ9UKE5 1360 aa11.33□□□□□ -0.6
SEC23IP-203ENST00000446561 SMARCA2P51531 1590 aa11.32□□□□□ -0.6
SEC23IP-203ENST00000446561 CEP162Q5TB80 1403 aa11.3□□□□□ -0.6
SEC23IP-203ENST00000446561 DIEXFQ68CQ4 756 aaKnown RBP11.28□□□□□ -0.6
SEC23IP-203ENST00000446561 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.26□□□□□ -0.61
SEC23IP-203ENST00000446561 CCDC88BA6NC98 1476 aa11.25□□□□□ -0.61
SEC23IP-203ENST00000446561 GOLGA3Q08378 1498 aa11.25□□□□□ -0.61
SEC23IP-203ENST00000446561 ABCC8Q09428 1581 aa11.24□□□□□ -0.61
SEC23IP-203ENST00000446561 UNC13AQ9UPW8 1703 aa11.23□□□□□ -0.61
SEC23IP-203ENST00000446561 KIF21BO75037 1637 aa11.23□□□□□ -0.61
SEC23IP-203ENST00000446561 EHMT2Q96KQ7 1210 aa11.22□□□□□ -0.61
SEC23IP-203ENST00000446561 NEUROD1Q13562 356 aa11.21□□□□□ -0.61
SEC23IP-203ENST00000446561 ZNF316A6NFI3 1004 aaPredicted RBP11.2□□□□□ -0.62
SEC23IP-203ENST00000446561 CSRNP3Q8WYN3 585 aa11.18□□□□□ -0.62
SEC23IP-203ENST00000446561 PEG3Q9GZU2 1588 aa11.18□□□□□ -0.62
SEC23IP-203ENST00000446561 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
SEC23IP-203ENST00000446561 BAZ1BQ9UIG0 1483 aaKnown RBP11.17□□□□□ -0.62
SEC23IP-203ENST00000446561 GTF3C3Q9Y5Q9 886 aa11.16□□□□□ -0.62
SEC23IP-203ENST00000446561 SOGA1O94964 1423 aa11.14□□□□□ -0.63
SEC23IP-203ENST00000446561 CLSPNQ9HAW4 1339 aa11.12□□□□□ -0.63
SEC23IP-203ENST00000446561 UBTFP17480 764 aaKnown RBP11.1□□□□□ -0.63
SEC23IP-203ENST00000446561 VPS8Q8N3P4 1428 aa11.09□□□□□ -0.63
SEC23IP-203ENST00000446561 CLIP1P30622 1438 aa11.06□□□□□ -0.64
SEC23IP-203ENST00000446561 KCNA4P22459 653 aa11.05□□□□□ -0.64
SEC23IP-203ENST00000446561 RUSC2Q8N2Y8 1516 aa11.04□□□□□ -0.64
SEC23IP-203ENST00000446561 SYNJ1O43426 1573 aa11.04□□□□□ -0.64
SEC23IP-203ENST00000446561 APLP2Q06481 763 aa11.04□□□□□ -0.64
SEC23IP-203ENST00000446561 ERICH3Q5RHP9 1530 aa11.01□□□□□ -0.65
SEC23IP-203ENST00000446561 BIVM-ERCC5R4GMW8 1640 aa11□□□□□ -0.65
SEC23IP-203ENST00000446561 BICRAQ9NZM4 1560 aa10.99□□□□□ -0.65
SEC23IP-203ENST00000446561 TOP2BQ02880 1626 aa10.98□□□□□ -0.65
SEC23IP-203ENST00000446561 TTBK1Q5TCY1 1321 aaPredicted RBP10.97□□□□□ -0.65
SEC23IP-203ENST00000446561 MIER1Q8N108 512 aa10.93□□□□□ -0.66
SEC23IP-203ENST00000446561 PIAS4Q8N2W9 510 aaPredicted RBP10.93□□□□□ -0.66
SEC23IP-203ENST00000446561 ATAD2BQ9ULI0 1458 aa10.93□□□□□ -0.66
SEC23IP-203ENST00000446561 HNRNPUL2Q1KMD3 747 aaKnown RBP10.92□□□□□ -0.66
SEC23IP-203ENST00000446561 RAPGEF2Q9Y4G8 1499 aa10.92□□□□□ -0.66
SEC23IP-203ENST00000446561 YTHDC1Q96MU7 727 aaKnown RBP10.9□□□□□ -0.66
SEC23IP-203ENST00000446561 CUX2O14529 1486 aa10.89□□□□□ -0.67
SEC23IP-203ENST00000446561 RRBP1Q9P2E9 1410 aaKnown RBP10.87□□□□□ -0.67
SEC23IP-203ENST00000446561 PRXQ9BXM0 1461 aa10.87□□□□□ -0.67
SEC23IP-203ENST00000446561 DHX57Q6P158 1386 aaKnown RBP10.86□□□□□ -0.67
SEC23IP-203ENST00000446561 ARAP1Q96P48 1450 aa10.85□□□□□ -0.67
SEC23IP-203ENST00000446561 PRDM2Q13029 1718 aa10.84□□□□□ -0.67
SEC23IP-203ENST00000446561 HMGXB3Q12766 1538 aa10.83□□□□□ -0.68
SEC23IP-203ENST00000446561 MAP3K1Q13233 1512 aa10.83□□□□□ -0.68
SEC23IP-203ENST00000446561 PPP4R3CPQ6ZMV5 832 aa10.81□□□□□ -0.68
SEC23IP-203ENST00000446561 KIF27Q86VH2 1401 aa10.81□□□□□ -0.68
SEC23IP-203ENST00000446561 CCNB3Q8WWL7 1395 aa10.77□□□□□ -0.69
SEC23IP-203ENST00000446561 CUX1P39880 1505 aa10.74□□□□□ -0.69
SEC23IP-203ENST00000446561 PABPN1Q86U42 306 aaKnown RBP eCLIP10.73□□□□□ -0.69
SEC23IP-203ENST00000446561 SUPT16HQ9Y5B9 1047 aaKnown RBP10.73□□□□□ -0.69
SEC23IP-203ENST00000446561 TIAM1Q13009 1591 aa10.73□□□□□ -0.69
SEC23IP-203ENST00000446561 CFAP43Q8NDM7 1665 aa10.73□□□□□ -0.69
SEC23IP-203ENST00000446561 NCAPD3P42695 1498 aa10.72□□□□□ -0.69
SEC23IP-203ENST00000446561 ARHGAP35Q9NRY4 1499 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 95.2 ms