Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.46■□□□□ 0.87
MMP2P08253 AL138781.1-201ENST00000566567 1274 ntBASIC20.46■□□□□ 0.87
MMP2P08253 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC20.46■□□□□ 0.87
MMP2P08253 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
MMP2P08253 AL109923.1-201ENST00000618799 583 ntBASIC20.46■□□□□ 0.87
MMP2P08253 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.46■□□□□ 0.87
MMP2P08253 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
MMP2P08253 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC20.46■□□□□ 0.87
MMP2P08253 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.46■□□□□ 0.87
MMP2P08253 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC20.46■□□□□ 0.87
MMP2P08253 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP2P08253 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP2P08253 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP2P08253 SLC29A4P1-201ENST00000398760 971 ntBASIC20.45■□□□□ 0.86
MMP2P08253 AC098934.4-201ENST00000564127 592 ntBASIC20.45■□□□□ 0.86
MMP2P08253 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP2P08253 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 PTCD3-220ENST00000627371 210 ntTSL 5 BASIC20.45■□□□□ 0.86
MMP2P08253 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC20.45■□□□□ 0.86
MMP2P08253 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 SRP68-201ENST00000307877 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 DPF1-217ENST00000614244 2356 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
MMP2P08253 PTBP1P-201ENST00000554374 1601 ntBASIC20.45■□□□□ 0.86
MMP2P08253 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
MMP2P08253 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.45■□□□□ 0.86
MMP2P08253 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.44■□□□□ 0.86
MMP2P08253 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP2P08253 C2orf69P4-201ENST00000565394 541 ntBASIC20.44■□□□□ 0.86
MMP2P08253 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC20.44■□□□□ 0.86
MMP2P08253 AC092118.2-201ENST00000613495 667 ntBASIC20.44■□□□□ 0.86
MMP2P08253 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC20.44■□□□□ 0.86
MMP2P08253 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
MMP2P08253 FGFRL1-203ENST00000504138 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
MMP2P08253 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
MMP2P08253 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP2P08253 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP2P08253 MKRN1-208ENST00000474576 1661 ntTSL 5 BASIC20.43■□□□□ 0.86
MMP2P08253 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 OR2A1-AS1-201ENST00000462305 773 ntBASIC20.43■□□□□ 0.86
MMP2P08253 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC20.43■□□□□ 0.86
MMP2P08253 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP2P08253 ATRAID-208ENST00000611786 1256 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC20.43■□□□□ 0.86
MMP2P08253 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
MMP2P08253 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP2P08253 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.42■□□□□ 0.86
MMP2P08253 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP2P08253 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP2P08253 HLA-L-209ENST00000420110 1011 ntBASIC20.42■□□□□ 0.86
MMP2P08253 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP2P08253 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.42■□□□□ 0.86
MMP2P08253 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC20.42■□□□□ 0.86
MMP2P08253 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.42■□□□□ 0.86
MMP2P08253 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
MMP2P08253 AC073130.3-201ENST00000624389 2278 ntBASIC20.42■□□□□ 0.86
MMP2P08253 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
MMP2P08253 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP2P08253 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.41■□□□□ 0.86
MMP2P08253 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MMP2P08253 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
MMP2P08253 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP2P08253 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP2P08253 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC20.41■□□□□ 0.86
MMP2P08253 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
MMP2P08253 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
MMP2P08253 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
MMP2P08253 PPP1R14BP2-201ENST00000426284 444 ntBASIC20.41■□□□□ 0.86
MMP2P08253 DUSP5P2-201ENST00000426873 1033 ntBASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms