Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND3P03897 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND3P03897 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND3P03897 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 TMEM204-201ENST00000253934 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 AC092720.2-201ENST00000602388 1665 ntBASIC20.59■□□□□ 0.89
MT-ND3P03897 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
MT-ND3P03897 AC006015.1-201ENST00000429970 570 ntBASIC20.59■□□□□ 0.89
MT-ND3P03897 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.59■□□□□ 0.89
MT-ND3P03897 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.59■□□□□ 0.89
MT-ND3P03897 CPT2-209ENST00000636935 803 ntTSL 5 BASIC20.59■□□□□ 0.89
MT-ND3P03897 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 NTN5-201ENST00000270235 1836 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
MT-ND3P03897 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.59■□□□□ 0.89
MT-ND3P03897 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
MT-ND3P03897 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.59■□□□□ 0.89
MT-ND3P03897 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND3P03897 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND3P03897 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC20.58■□□□□ 0.89
MT-ND3P03897 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.58■□□□□ 0.89
MT-ND3P03897 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
MT-ND3P03897 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND3P03897 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
MT-ND3P03897 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
MT-ND3P03897 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
MT-ND3P03897 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.58■□□□□ 0.89
MT-ND3P03897 AC053503.5-201ENST00000601508 636 ntBASIC20.58■□□□□ 0.89
MT-ND3P03897 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 AC061975.6-201ENST00000579045 1553 ntBASIC20.58■□□□□ 0.88
MT-ND3P03897 KREMEN2-202ENST00000319500 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC20.58■□□□□ 0.88
MT-ND3P03897 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC20.58■□□□□ 0.88
MT-ND3P03897 SUMF2-204ENST00000395436 1683 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
MT-ND3P03897 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC20.57■□□□□ 0.88
MT-ND3P03897 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC20.57■□□□□ 0.88
MT-ND3P03897 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC20.57■□□□□ 0.88
MT-ND3P03897 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.57■□□□□ 0.88
MT-ND3P03897 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.57■□□□□ 0.88
MT-ND3P03897 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC20.57■□□□□ 0.88
MT-ND3P03897 FAXDC2-211ENST00000520968 558 ntTSL 4 BASIC20.57■□□□□ 0.88
MT-ND3P03897 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC20.57■□□□□ 0.88
MT-ND3P03897 AC007114.1-201ENST00000576871 713 ntTSL 2 BASIC20.57■□□□□ 0.88
MT-ND3P03897 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 CRHR1-214ENST00000619154 2370 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
MT-ND3P03897 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 EEF1A2-202ENST00000298049 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.56■□□□□ 0.88
MT-ND3P03897 ID1-201ENST00000376105 1233 ntBASIC20.56■□□□□ 0.88
MT-ND3P03897 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.56■□□□□ 0.88
MT-ND3P03897 HSCB-202ENST00000398941 955 ntTSL 2 BASIC20.56■□□□□ 0.88
MT-ND3P03897 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.56■□□□□ 0.88
MT-ND3P03897 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 EEF1DP3-203ENST00000566025 782 ntBASIC20.56■□□□□ 0.88
MT-ND3P03897 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 STX6-204ENST00000542060 4809 ntTSL 2 BASIC20.56■□□□□ 0.88
MT-ND3P03897 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC20.56■□□□□ 0.88
MT-ND3P03897 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC20.56■□□□□ 0.88
MT-ND3P03897 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
MT-ND3P03897 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
MT-ND3P03897 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20.55■□□□□ 0.88
MT-ND3P03897 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 KRT18P11-201ENST00000435214 1283 ntBASIC20.55■□□□□ 0.88
MT-ND3P03897 AC079140.4-201ENST00000507448 529 ntBASIC20.55■□□□□ 0.88
MT-ND3P03897 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.55■□□□□ 0.88
MT-ND3P03897 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.55■□□□□ 0.88
MT-ND3P03897 DBI-210ENST00000542275 757 ntTSL 5 BASIC20.55■□□□□ 0.88
MT-ND3P03897 AC080038.1-201ENST00000611274 1154 ntBASIC20.55■□□□□ 0.88
MT-ND3P03897 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC20.55■□□□□ 0.88
MT-ND3P03897 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
MT-ND3P03897 CERKL-204ENST00000374970 1392 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
MT-ND3P03897 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms