Protein–RNA interactions for Protein: O95170

CDRT1, CMT1A duplicated region transcript 1 protein, humanhuman

Predictions only

Length 752 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1O95170 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.03■□□□□ 0.48
CDRT1O95170 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
CDRT1O95170 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.03■□□□□ 0.48
CDRT1O95170 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.03■□□□□ 0.48
CDRT1O95170 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
CDRT1O95170 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
CDRT1O95170 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 UBALD1-208ENST00000591401 1305 ntTSL 5 BASIC18.02■□□□□ 0.48
CDRT1O95170 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.02■□□□□ 0.48
CDRT1O95170 CYHR1-201ENST00000306145 1409 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 AL136116.3-201ENST00000402907 1138 ntBASIC18.02■□□□□ 0.48
CDRT1O95170 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.02■□□□□ 0.48
CDRT1O95170 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.02■□□□□ 0.48
CDRT1O95170 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC18.02■□□□□ 0.48
CDRT1O95170 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.02■□□□□ 0.48
CDRT1O95170 SMUG1P1-201ENST00000590640 811 ntBASIC18.02■□□□□ 0.48
CDRT1O95170 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.02■□□□□ 0.48
CDRT1O95170 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC18.02■□□□□ 0.48
CDRT1O95170 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
CDRT1O95170 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
CDRT1O95170 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC18.02■□□□□ 0.47
CDRT1O95170 FOSL1-201ENST00000312562 1669 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDRT1O95170 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.02■□□□□ 0.47
CDRT1O95170 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
CDRT1O95170 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
CDRT1O95170 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.47
CDRT1O95170 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
CDRT1O95170 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.01■□□□□ 0.47
CDRT1O95170 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 ZNF419-203ENST00000354197 1569 ntTSL 5 BASIC18.01■□□□□ 0.47
CDRT1O95170 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.01■□□□□ 0.47
CDRT1O95170 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
CDRT1O95170 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC18.01■□□□□ 0.47
CDRT1O95170 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC18.01■□□□□ 0.47
CDRT1O95170 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC18.01■□□□□ 0.47
CDRT1O95170 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC18.01■□□□□ 0.47
CDRT1O95170 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
CDRT1O95170 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 ASL-203ENST00000380839 1765 ntTSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC18■□□□□ 0.47
CDRT1O95170 MIR4767-201ENST00000582827 78 ntBASIC18■□□□□ 0.47
CDRT1O95170 CTAG1A-201ENST00000593606 993 ntTSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
CDRT1O95170 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
CDRT1O95170 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18■□□□□ 0.47
CDRT1O95170 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18■□□□□ 0.47
CDRT1O95170 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 PXK-203ENST00000383715 1756 ntTSL 5 BASIC17.99■□□□□ 0.47
CDRT1O95170 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
CDRT1O95170 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC17.99■□□□□ 0.47
CDRT1O95170 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
CDRT1O95170 BX842568.3-201ENST00000418104 571 ntBASIC17.99■□□□□ 0.47
CDRT1O95170 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC17.99■□□□□ 0.47
CDRT1O95170 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC17.99■□□□□ 0.47
CDRT1O95170 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 45.4 ms