Protein–RNA interactions for Protein: O95164

UBL3, Ubiquitin-like protein 3, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3O95164 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
UBL3O95164 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 DR1-201ENST00000370267 1647 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
UBL3O95164 AC004911.1-201ENST00000416316 871 ntBASIC18.14■□□□□ 0.49
UBL3O95164 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL3O95164 AC013268.1-206ENST00000638368 961 ntBASIC18.14■□□□□ 0.49
UBL3O95164 AC112229.1-201ENST00000639295 961 ntBASIC18.14■□□□□ 0.49
UBL3O95164 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC18.14■□□□□ 0.49
UBL3O95164 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
UBL3O95164 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC18.14■□□□□ 0.49
UBL3O95164 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
UBL3O95164 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
UBL3O95164 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBL3O95164 PLK5-205ENST00000642079 1969 ntBASIC18.13■□□□□ 0.49
UBL3O95164 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.13■□□□□ 0.49
UBL3O95164 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 BMP1-204ENST00000397814 836 ntTSL 4 BASIC18.13■□□□□ 0.49
UBL3O95164 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.13■□□□□ 0.49
UBL3O95164 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL3O95164 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.13■□□□□ 0.49
UBL3O95164 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC18.13■□□□□ 0.49
UBL3O95164 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
UBL3O95164 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.13■□□□□ 0.49
UBL3O95164 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
UBL3O95164 BIN2-210ENST00000615107 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL3O95164 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 ERF-202ENST00000440177 2032 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL3O95164 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 BID-204ENST00000399767 2129 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL3O95164 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.12■□□□□ 0.49
UBL3O95164 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL3O95164 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
UBL3O95164 AC231657.2-201ENST00000624556 255 ntBASIC18.12■□□□□ 0.49
UBL3O95164 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
UBL3O95164 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 CERS4-209ENST00000559450 1637 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
UBL3O95164 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC18.12■□□□□ 0.49
UBL3O95164 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBL3O95164 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
UBL3O95164 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL3O95164 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL3O95164 AC007322.4-201ENST00000509611 723 ntBASIC18.11■□□□□ 0.49
UBL3O95164 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC18.11■□□□□ 0.49
UBL3O95164 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.11■□□□□ 0.49
UBL3O95164 OTUB1-211ENST00000543004 1647 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL3O95164 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 AC027702.1-201ENST00000563810 1770 ntBASIC18.11■□□□□ 0.49
UBL3O95164 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.11■□□□□ 0.49
UBL3O95164 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 TRIM15-210ENST00000619857 2217 ntTSL 5 BASIC18.11■□□□□ 0.49
UBL3O95164 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.11■□□□□ 0.49
UBL3O95164 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
UBL3O95164 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
UBL3O95164 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC18.1■□□□□ 0.49
UBL3O95164 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
UBL3O95164 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms