Protein–RNA interactions for Protein: O75486

SUPT3H, Transcription initiation protein SPT3 homolog, humanhuman

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT3HO75486 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 AC007322.3-201ENST00000426526 701 ntBASIC20.02■□□□□ 0.8
SUPT3HO75486 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC20.02■□□□□ 0.8
SUPT3HO75486 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 SLC7A5P1-201ENST00000568957 537 ntBASIC20.02■□□□□ 0.8
SUPT3HO75486 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 UBE2DNL-204ENST00000602536 740 ntBASIC20.02■□□□□ 0.8
SUPT3HO75486 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC20.02■□□□□ 0.8
SUPT3HO75486 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
SUPT3HO75486 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
SUPT3HO75486 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.79
SUPT3HO75486 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
SUPT3HO75486 AC138932.1-201ENST00000534164 6830 ntBASIC20.02■□□□□ 0.79
SUPT3HO75486 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC20.01■□□□□ 0.79
SUPT3HO75486 AL162377.1-201ENST00000618844 1793 ntBASIC20.01■□□□□ 0.79
SUPT3HO75486 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC20.01■□□□□ 0.79
SUPT3HO75486 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 MFSD7-204ENST00000503156 1632 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
SUPT3HO75486 TMPRSS5-208ENST00000544476 1320 ntTSL 2 BASIC20.01■□□□□ 0.79
SUPT3HO75486 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC20.01■□□□□ 0.79
SUPT3HO75486 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC20■□□□□ 0.79
SUPT3HO75486 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
SUPT3HO75486 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC20■□□□□ 0.79
SUPT3HO75486 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
SUPT3HO75486 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC20■□□□□ 0.79
SUPT3HO75486 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 AC112907.3-201ENST00000577781 2400 ntBASIC20■□□□□ 0.79
SUPT3HO75486 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20■□□□□ 0.79
SUPT3HO75486 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SUPT3HO75486 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC20■□□□□ 0.79
SUPT3HO75486 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20■□□□□ 0.79
SUPT3HO75486 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20■□□□□ 0.79
SUPT3HO75486 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
SUPT3HO75486 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SUPT3HO75486 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUPT3HO75486 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC19.99■□□□□ 0.79
SUPT3HO75486 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
SUPT3HO75486 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC19.99■□□□□ 0.79
SUPT3HO75486 PDE9A-212ENST00000398234 1783 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUPT3HO75486 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.99■□□□□ 0.79
SUPT3HO75486 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.99■□□□□ 0.79
SUPT3HO75486 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.99■□□□□ 0.79
SUPT3HO75486 SPOCK2-209ENST00000536168 1824 ntAPPRIS ALT2 TSL 5 BASIC19.99■□□□□ 0.79
SUPT3HO75486 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC19.99■□□□□ 0.79
SUPT3HO75486 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
SUPT3HO75486 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.98■□□□□ 0.79
SUPT3HO75486 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
SUPT3HO75486 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SUPT3HO75486 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC19.98■□□□□ 0.79
SUPT3HO75486 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.98■□□□□ 0.79
SUPT3HO75486 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.98■□□□□ 0.79
SUPT3HO75486 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.98■□□□□ 0.79
SUPT3HO75486 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
SUPT3HO75486 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.98■□□□□ 0.79
SUPT3HO75486 AC099778.1-201ENST00000568593 1911 ntBASIC19.98■□□□□ 0.79
SUPT3HO75486 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC19.98■□□□□ 0.79
SUPT3HO75486 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.98■□□□□ 0.79
SUPT3HO75486 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms