Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC18.89■□□□□ 0.62
HCN1O60741 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.89■□□□□ 0.62
HCN1O60741 AIRN-201ENST00000601203 4374 ntBASIC18.89■□□□□ 0.62
HCN1O60741 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC18.89■□□□□ 0.61
HCN1O60741 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 ADM-207ENST00000530439 1839 ntTSL 2 BASIC18.89■□□□□ 0.61
HCN1O60741 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
HCN1O60741 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 CD44-222ENST00000526025 1052 ntTSL 2 BASIC18.89■□□□□ 0.61
HCN1O60741 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 AC133041.1-202ENST00000642053 222 ntBASIC18.89■□□□□ 0.61
HCN1O60741 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC18.89■□□□□ 0.61
HCN1O60741 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 ME2-216ENST00000639850 2331 ntTSL 5 BASIC18.89■□□□□ 0.61
HCN1O60741 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
HCN1O60741 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
HCN1O60741 AC121338.2-201ENST00000622535 1744 ntBASIC18.88■□□□□ 0.61
HCN1O60741 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 CERS1-202ENST00000542296 1947 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HCN1O60741 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.88■□□□□ 0.61
HCN1O60741 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.88■□□□□ 0.61
HCN1O60741 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HCN1O60741 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HCN1O60741 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
HCN1O60741 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.88■□□□□ 0.61
HCN1O60741 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
HCN1O60741 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
HCN1O60741 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HCN1O60741 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 MKRN4P-201ENST00000444706 1521 ntBASIC18.87■□□□□ 0.61
HCN1O60741 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.87■□□□□ 0.61
HCN1O60741 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC18.87■□□□□ 0.61
HCN1O60741 AC245052.3-201ENST00000450182 901 ntBASIC18.87■□□□□ 0.61
HCN1O60741 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
HCN1O60741 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC18.87■□□□□ 0.61
HCN1O60741 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
HCN1O60741 AL138781.1-201ENST00000566567 1274 ntBASIC18.87■□□□□ 0.61
HCN1O60741 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC18.87■□□□□ 0.61
HCN1O60741 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC18.87■□□□□ 0.61
HCN1O60741 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
HCN1O60741 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.86■□□□□ 0.61
HCN1O60741 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HCN1O60741 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 AC069152.1-201ENST00000438030 544 ntBASIC18.86■□□□□ 0.61
HCN1O60741 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.86■□□□□ 0.61
HCN1O60741 MIR4758-201ENST00000577688 71 ntBASIC18.86■□□□□ 0.61
HCN1O60741 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC18.86■□□□□ 0.61
HCN1O60741 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
HCN1O60741 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
HCN1O60741 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.86■□□□□ 0.61
HCN1O60741 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.86■□□□□ 0.61
HCN1O60741 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
HCN1O60741 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
HCN1O60741 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC18.85■□□□□ 0.61
HCN1O60741 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.85■□□□□ 0.61
HCN1O60741 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
HCN1O60741 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC18.85■□□□□ 0.61
HCN1O60741 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC18.85■□□□□ 0.61
HCN1O60741 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC18.85■□□□□ 0.61
HCN1O60741 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms