Protein–RNA interactions for Protein: O60330

PCDHGA12, Protocadherin gamma-A12, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA12O60330 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 C2orf69P4-201ENST00000565394 541 ntBASIC20.1■□□□□ 0.81
PCDHGA12O60330 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 AC233702.5-201ENST00000584107 538 ntBASIC20.1■□□□□ 0.81
PCDHGA12O60330 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 SCARB2-219ENST00000639738 1517 ntTSL 5 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 AC116050.2-201ENST00000612102 1779 ntBASIC20.1■□□□□ 0.81
PCDHGA12O60330 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 SEC61A2-205ENST00000379033 2462 ntTSL 2 BASIC20.1■□□□□ 0.81
PCDHGA12O60330 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
PCDHGA12O60330 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 AC005229.4-201ENST00000610085 2198 ntBASIC20.09■□□□□ 0.81
PCDHGA12O60330 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 PKD1P6-201ENST00000343738 4769 ntBASIC20.09■□□□□ 0.81
PCDHGA12O60330 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PCDHGA12O60330 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC20.09■□□□□ 0.81
PCDHGA12O60330 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA12O60330 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA12O60330 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PCDHGA12O60330 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 AC211429.1-201ENST00000415277 523 ntBASIC20.08■□□□□ 0.81
PCDHGA12O60330 FAM210CP-201ENST00000445714 574 ntBASIC20.08■□□□□ 0.81
PCDHGA12O60330 AC133681.1-201ENST00000465482 601 ntBASIC20.08■□□□□ 0.81
PCDHGA12O60330 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
PCDHGA12O60330 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PCDHGA12O60330 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC20.08■□□□□ 0.81
PCDHGA12O60330 MTDHP1-201ENST00000605323 784 ntBASIC20.08■□□□□ 0.81
PCDHGA12O60330 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA12O60330 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA12O60330 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA12O60330 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
PCDHGA12O60330 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC20.08■□□□□ 0.8
PCDHGA12O60330 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA12O60330 RPS2P55-201ENST00000397318 883 ntBASIC20.07■□□□□ 0.8
PCDHGA12O60330 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.07■□□□□ 0.8
PCDHGA12O60330 AC107956.1-201ENST00000494359 873 ntBASIC20.07■□□□□ 0.8
PCDHGA12O60330 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC20.07■□□□□ 0.8
PCDHGA12O60330 LINC01023-201ENST00000606054 436 ntBASIC20.07■□□□□ 0.8
PCDHGA12O60330 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.07■□□□□ 0.8
PCDHGA12O60330 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
PCDHGA12O60330 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 GGT1-206ENST00000404223 952 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 RPS20-210ENST00000523936 899 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.06■□□□□ 0.8
PCDHGA12O60330 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
PCDHGA12O60330 AC073130.3-201ENST00000624389 2278 ntBASIC20.06■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.1 ms