Protein–RNA interactions for Protein: O43924

PDE6D, Retinal rod rhodopsin-sensitive cGMP 3',5'-cyclic phosphodiesterase subunit delta, humanhuman

Predictions only

Length 150 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6DO43924 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 SLC38A7-205ENST00000564010 1437 ntTSL 2 BASIC15.7■□□□□ 0.1
PDE6DO43924 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC15.7■□□□□ 0.1
PDE6DO43924 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC15.7■□□□□ 0.1
PDE6DO43924 Z82202.1-201ENST00000623446 1880 ntBASIC15.7■□□□□ 0.1
PDE6DO43924 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
PDE6DO43924 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
PDE6DO43924 AC004987.1-201ENST00000428627 508 ntBASIC15.7■□□□□ 0.1
PDE6DO43924 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC15.7■□□□□ 0.1
PDE6DO43924 AL031848.2-201ENST00000607670 837 ntBASIC15.7■□□□□ 0.1
PDE6DO43924 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 ANAPC1P1-202ENST00000616781 1771 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
PDE6DO43924 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 AC020763.4-201ENST00000623414 4170 ntBASIC15.69■□□□□ 0.1
PDE6DO43924 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
PDE6DO43924 NEFHP1-201ENST00000412845 2629 ntBASIC15.69■□□□□ 0.1
PDE6DO43924 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC15.69■□□□□ 0.1
PDE6DO43924 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC15.69■□□□□ 0.1
PDE6DO43924 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC15.69■□□□□ 0.1
PDE6DO43924 AC006455.2-201ENST00000429931 906 ntBASIC15.69■□□□□ 0.1
PDE6DO43924 AC103834.1-201ENST00000520383 144 ntBASIC15.69■□□□□ 0.1
PDE6DO43924 NTF6A-201ENST00000591175 560 ntBASIC15.69■□□□□ 0.1
PDE6DO43924 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC15.69■□□□□ 0.1
PDE6DO43924 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 GNB2-206ENST00000424361 1478 ntTSL 5 BASIC15.69■□□□□ 0.1
PDE6DO43924 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
PDE6DO43924 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC15.69■□□□□ 0.1
PDE6DO43924 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
PDE6DO43924 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
PDE6DO43924 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PDE6DO43924 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDE6DO43924 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
PDE6DO43924 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDE6DO43924 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.68■□□□□ 0.1
PDE6DO43924 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
PDE6DO43924 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC15.68■□□□□ 0.1
PDE6DO43924 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
PDE6DO43924 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
PDE6DO43924 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
PDE6DO43924 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
PDE6DO43924 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 AC005082.1-201ENST00000413042 2259 ntBASIC15.68■□□□□ 0.1
PDE6DO43924 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC15.68■□□□□ 0.1
PDE6DO43924 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
PDE6DO43924 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC15.67■□□□□ 0.1
PDE6DO43924 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
PDE6DO43924 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC15.67■□□□□ 0.1
PDE6DO43924 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 AC055733.4-201ENST00000638462 1354 ntBASIC15.67■□□□□ 0.1
PDE6DO43924 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 MBP-237ENST00000579129 1052 ntTSL 5 BASIC15.67■□□□□ 0.1
PDE6DO43924 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
PDE6DO43924 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms