Protein–RNA interactions for Protein: O15232

MATN3, Matrilin-3, humanhuman

Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MATN3O15232 RASSF7-204ENST00000431809 1745 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.9
MATN3O15232 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC20.64■□□□□ 0.9
MATN3O15232 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
MATN3O15232 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MATN3O15232 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC20.64■□□□□ 0.89
MATN3O15232 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC20.64■□□□□ 0.89
MATN3O15232 AC090192.1-201ENST00000517740 490 ntBASIC20.64■□□□□ 0.89
MATN3O15232 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC20.64■□□□□ 0.89
MATN3O15232 WT1-AS_3.1-201ENST00000613262 234 ntBASIC20.64■□□□□ 0.89
MATN3O15232 GPAA1-201ENST00000355091 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
MATN3O15232 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC20.64■□□□□ 0.89
MATN3O15232 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
MATN3O15232 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.64■□□□□ 0.89
MATN3O15232 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
MATN3O15232 DPP3P2-201ENST00000416030 1696 ntBASIC20.64■□□□□ 0.89
MATN3O15232 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
MATN3O15232 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.63■□□□□ 0.89
MATN3O15232 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
MATN3O15232 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.63■□□□□ 0.89
MATN3O15232 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC20.63■□□□□ 0.89
MATN3O15232 GPX1P1-201ENST00000388829 606 ntBASIC20.63■□□□□ 0.89
MATN3O15232 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 BX276092.2-201ENST00000417668 665 ntBASIC20.63■□□□□ 0.89
MATN3O15232 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC20.63■□□□□ 0.89
MATN3O15232 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
MATN3O15232 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.63■□□□□ 0.89
MATN3O15232 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
MATN3O15232 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 AC005224.2-201ENST00000571192 1885 ntTSL 2 BASIC20.62■□□□□ 0.89
MATN3O15232 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
MATN3O15232 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MATN3O15232 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 LSM12P1-201ENST00000411836 588 ntBASIC20.62■□□□□ 0.89
MATN3O15232 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC20.62■□□□□ 0.89
MATN3O15232 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MATN3O15232 GUSBP6-202ENST00000438529 1198 ntBASIC20.62■□□□□ 0.89
MATN3O15232 TSPY6P-201ENST00000448518 926 ntBASIC20.62■□□□□ 0.89
MATN3O15232 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC20.62■□□□□ 0.89
MATN3O15232 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
MATN3O15232 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
MATN3O15232 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC20.62■□□□□ 0.89
MATN3O15232 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.62■□□□□ 0.89
MATN3O15232 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
MATN3O15232 SMG8-203ENST00000578922 2178 ntBASIC20.62■□□□□ 0.89
MATN3O15232 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
MATN3O15232 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC20.61■□□□□ 0.89
MATN3O15232 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MATN3O15232 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MATN3O15232 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.61■□□□□ 0.89
MATN3O15232 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
MATN3O15232 MIPEPP3-201ENST00000412105 444 ntBASIC20.61■□□□□ 0.89
MATN3O15232 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC20.61■□□□□ 0.89
MATN3O15232 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC20.61■□□□□ 0.89
MATN3O15232 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.61■□□□□ 0.89
MATN3O15232 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MATN3O15232 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.61■□□□□ 0.89
MATN3O15232 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.61■□□□□ 0.89
MATN3O15232 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
MATN3O15232 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
MATN3O15232 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
MATN3O15232 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC20.61■□□□□ 0.89
MATN3O15232 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
MATN3O15232 NXN-202ENST00000537628 1340 ntTSL 3 BASIC20.6■□□□□ 0.89
MATN3O15232 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
MATN3O15232 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
MATN3O15232 RNH1-202ENST00000356187 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MATN3O15232 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
MATN3O15232 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MATN3O15232 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
MATN3O15232 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC20.6■□□□□ 0.89
MATN3O15232 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.6■□□□□ 0.89
MATN3O15232 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC20.6■□□□□ 0.89
MATN3O15232 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
MATN3O15232 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
MATN3O15232 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
MATN3O15232 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.6■□□□□ 0.89
MATN3O15232 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms