Protein–RNA interactions for Protein: O15226

NKRF, NF-kappa-B-repressing factor, humanhuman

Known RBP eCLIP

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKRFO15226 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC23.21■■□□□ 1.316e-8■□□□□ 11.2
NKRFO15226 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.046e-8■□□□□ 11.2
NKRFO15226 GSPT1-201ENST00000420576 1603 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.556e-8■□□□□ 11.2
NKRFO15226 ASPSCR1-220ENST00000585140 447 ntTSL 321.73■■□□□ 1.078e-15■□□□□ 11.2
NKRFO15226 ARFRP1-206ENST00000610774 5178 ntTSL 214.66□□□□□ -0.067e-7■□□□□ 11.2
NKRFO15226 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.89■□□□□ 0.615e-7■□□□□ 11.2
NKRFO15226 NF1-204ENST00000431387 2889 ntTSL 1 (best) BASIC15.08■□□□□ 0.015e-7■□□□□ 11.2
NKRFO15226 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.83□□□□□ -1.325e-7■□□□□ 11.2
NKRFO15226 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC6.78□□□□□ -1.325e-7■□□□□ 11.2
NKRFO15226 NF1-219ENST00000579081 8788 ntTSL 1 (best)5.15□□□□□ -1.595e-7■□□□□ 11.2
NKRFO15226 AFP-207ENST00000515675 317 ntTSL 1 (best)5.63□□□□□ -1.512e-39■□□□□ 11.2
NKRFO15226 AFP-205ENST00000513720 197 ntTSL 1 (best)3.97□□□□□ -1.772e-39■□□□□ 11.2
NKRFO15226 CPSF6-205ENST00000550075 540 ntTSL 429.85■■■□□ 2.376e-9■□□□□ 11.2
NKRFO15226 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC28.15■■■□□ 2.15e-7■□□□□ 11.2
NKRFO15226 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.955e-7■□□□□ 11.2
NKRFO15226 UBE2I-208ENST00000473256 1771 ntTSL 220.72■□□□□ 0.915e-7■□□□□ 11.2
NKRFO15226 UBE2I-218ENST00000568288 501 ntTSL 519.86■□□□□ 0.775e-7■□□□□ 11.2
NKRFO15226 UBE2I-216ENST00000567383 538 ntTSL 419.84■□□□□ 0.775e-7■□□□□ 11.2
NKRFO15226 UBE2I-217ENST00000568209 266 ntTSL 519.56■□□□□ 0.725e-7■□□□□ 11.2
NKRFO15226 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC18.77■□□□□ 0.66e-9■□□□□ 11.2
NKRFO15226 UBE2I-210ENST00000562482 735 ntTSL 218.64■□□□□ 0.575e-7■□□□□ 11.2
NKRFO15226 UBE2I-201ENST00000325437 2832 ntAPPRIS P1 TSL 3 BASIC16.22■□□□□ 0.195e-7■□□□□ 11.2
NKRFO15226 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.165e-7■□□□□ 11.2
NKRFO15226 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.095e-7■□□□□ 11.2
NKRFO15226 UBE2I-202ENST00000355803 3253 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.035e-7■□□□□ 11.2
NKRFO15226 CPSF6-201ENST00000266679 2229 ntTSL 1 (best) BASIC14.38□□□□□ -0.116e-9■□□□□ 11.2
NKRFO15226 CPSF6-202ENST00000435070 6616 ntAPPRIS P1 TSL 1 (best) BASIC8.23□□□□□ -1.096e-9■□□□□ 11.2
NKRFO15226 CPSF6-206ENST00000550987 560 ntTSL 46.81□□□□□ -1.326e-9■□□□□ 11.2
NKRFO15226 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.95□□□□□ -1.946e-9■□□□□ 11.2
NKRFO15226 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC3.2□□□□□ -1.92e-8■□□□□ 11.2
NKRFO15226 MXD4-204ENST00000513380 624 ntTSL 514.58□□□□□ -0.083e-6■□□□□ 11.2
NKRFO15226 BRD4-205ENST00000594841 1821 ntAPPRIS ALT2 TSL 1 (best)15.82■□□□□ 0.121e-9■□□□□ 11.2
NKRFO15226 BRD4-210ENST00000601941 604 ntTSL 513.49□□□□□ -0.251e-9■□□□□ 11.2
NKRFO15226 ASPSCR1-210ENST00000581608 2387 ntTSL 223.08■■□□□ 1.294e-11■□□□□ 11.2
NKRFO15226 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.3■□□□□ 0.043e-6■□□□□ 11.2
NKRFO15226 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.545e-7■□□□□ 11.2
NKRFO15226 TBCD-207ENST00000571796 1940 ntTSL 1 (best)19.96■□□□□ 0.791e-8■□□□□ 11.2
NKRFO15226 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC17.14■□□□□ 0.331e-8■□□□□ 11.2
NKRFO15226 TBCD-225ENST00000576996 827 ntTSL 517.1■□□□□ 0.331e-8■□□□□ 11.2
NKRFO15226 TBCD-224ENST00000576760 1059 ntTSL 514.07□□□□□ -0.161e-8■□□□□ 11.2
NKRFO15226 TBCD-210ENST00000572953 702 ntTSL 513.09□□□□□ -0.311e-8■□□□□ 11.2
NKRFO15226 TBCD-213ENST00000574422 879 ntTSL 212.94□□□□□ -0.341e-8■□□□□ 11.2
NKRFO15226 TBCD-206ENST00000571712 850 ntTSL 512.79□□□□□ -0.361e-8■□□□□ 11.2
NKRFO15226 TBCD-205ENST00000571618 775 ntTSL 312.56□□□□□ -0.41e-8■□□□□ 11.2
NKRFO15226 TBCD-217ENST00000574975 867 ntTSL 512.1□□□□□ -0.471e-8■□□□□ 11.2
NKRFO15226 TBCD-219ENST00000576160 942 ntTSL 511.58□□□□□ -0.561e-8■□□□□ 11.2
NKRFO15226 TBCD-201ENST00000355528 7168 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.591e-8■□□□□ 11.2
NKRFO15226 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC23.39■■□□□ 1.332e-7■□□□□ 11.2
NKRFO15226 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC20.25■□□□□ 0.832e-7■□□□□ 11.2
NKRFO15226 TRIB3-203ENST00000449710 1070 ntTSL 519.9■□□□□ 0.782e-7■□□□□ 11.2
NKRFO15226 TRIB3-204ENST00000615226 877 ntTSL 36.04□□□□□ -1.442e-7■□□□□ 11.2
NKRFO15226 GDPD5-204ENST00000526177 4150 ntTSL 1 (best) BASIC14.5□□□□□ -0.098e-7■□□□□ 11.2
NKRFO15226 GDPD5-202ENST00000443276 3106 ntTSL 5 BASIC14.05□□□□□ -0.168e-7■□□□□ 11.2
NKRFO15226 GDPD5-205ENST00000527322 1000 ntTSL 1 (best)13.19□□□□□ -0.38e-7■□□□□ 11.2
NKRFO15226 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC16.53■□□□□ 0.242e-6■□□□□ 11.2
NKRFO15226 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.56■■□□□ 1.24e-6■□□□□ 11.2
NKRFO15226 MAEA-206ENST00000503693 1182 ntTSL 1 (best)22.47■■□□□ 1.194e-6■□□□□ 11.2
NKRFO15226 MAEA-212ENST00000509531 1001 ntTSL 1 (best)22.47■■□□□ 1.194e-6■□□□□ 11.2
NKRFO15226 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC22.31■■□□□ 1.164e-6■□□□□ 11.2
NKRFO15226 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC20.2■□□□□ 0.824e-6■□□□□ 11.2
NKRFO15226 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.82■□□□□ 0.764e-6■□□□□ 11.2
NKRFO15226 MAEA-216ENST00000512308 839 ntTSL 519.7■□□□□ 0.744e-6■□□□□ 11.2
NKRFO15226 MAEA-203ENST00000502558 570 ntTSL 219.37■□□□□ 0.694e-6■□□□□ 11.2
NKRFO15226 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.634e-6■□□□□ 11.2
NKRFO15226 MAEA-211ENST00000509254 598 ntTSL 418.69■□□□□ 0.584e-6■□□□□ 11.2
NKRFO15226 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.13■□□□□ 0.174e-6■□□□□ 11.2
NKRFO15226 MAEA-205ENST00000503653 845 ntTSL 315□□□□□ -0.014e-6■□□□□ 11.2
NKRFO15226 TGIF1-202ENST00000343820 2076 ntAPPRIS P1 TSL 1 (best) BASIC33.64■■■□□ 2.983e-6■□□□□ 11.2
NKRFO15226 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC24.24■■□□□ 1.473e-6■□□□□ 11.2
NKRFO15226 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC23.51■■□□□ 1.353e-6■□□□□ 11.2
NKRFO15226 ESPN-213ENST00000632803 455 ntTSL 323.18■■□□□ 1.31e-6■□□□□ 11.2
NKRFO15226 ESPN-212ENST00000632593 506 ntTSL 222.48■■□□□ 1.191e-6■□□□□ 11.2
NKRFO15226 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.23■■□□□ 1.153e-6■□□□□ 11.2
NKRFO15226 TGIF1-221ENST00000552383 1267 ntTSL 219.48■□□□□ 0.713e-6■□□□□ 11.2
NKRFO15226 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.561e-6■□□□□ 11.2
NKRFO15226 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC18.41■□□□□ 0.543e-6■□□□□ 11.2
NKRFO15226 TGIF1-218ENST00000551402 1089 ntTSL 2 BASIC16.54■□□□□ 0.243e-6■□□□□ 11.2
NKRFO15226 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.111e-6■□□□□ 11.2
NKRFO15226 TGIF1-209ENST00000546979 554 ntTSL 315.59■□□□□ 0.093e-6■□□□□ 11.2
NKRFO15226 TGIF1-216ENST00000550958 706 ntTSL 310.43□□□□□ -0.743e-6■□□□□ 11.2
NKRFO15226 TGIF1-223ENST00000618001 3030 ntTSL 2 BASIC9.58□□□□□ -0.883e-6■□□□□ 11.2
NKRFO15226 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC7.37□□□□□ -1.233e-6■□□□□ 11.2
NKRFO15226 TGIF1-215ENST00000549780 801 ntTSL 56.22□□□□□ -1.413e-6■□□□□ 11.2
NKRFO15226 TGIF1-212ENST00000549253 563 ntTSL 35.81□□□□□ -1.483e-6■□□□□ 11.2
NKRFO15226 FGFR3-209ENST00000507588 336 ntTSL 1 (best)21.8■■□□□ 1.083e-8■□□□□ 11.2
NKRFO15226 PPP4R2-203ENST00000470976 1033 ntTSL 231.05■■■□□ 2.566e-9■□□□□ 11.2
NKRFO15226 PPP4R2-205ENST00000482242 771 ntTSL 330.67■■■□□ 2.56e-9■□□□□ 11.2
NKRFO15226 PPP4R2-206ENST00000488810 877 ntTSL 530.16■■■□□ 2.426e-9■□□□□ 11.2
NKRFO15226 UBA2-210ENST00000607361 754 ntTSL 229.88■■■□□ 2.376e-9■□□□□ 11.2
NKRFO15226 ASPHD1-205ENST00000566693 1732 ntTSL 1 (best)27.31■■□□□ 1.961e-15■□□□□ 11.2
NKRFO15226 DHFR-203ENST00000505337 1719 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.966e-9■□□□□ 11.2
NKRFO15226 ASPHD1-202ENST00000414952 1451 ntTSL 227.28■■□□□ 1.961e-15■□□□□ 11.2
NKRFO15226 UBA2-203ENST00000586313 1458 ntTSL 225.4■■□□□ 1.666e-9■□□□□ 11.2
NKRFO15226 ASPHD1-204ENST00000563177 775 ntAPPRIS ALT2 TSL 522.92■■□□□ 1.261e-15■□□□□ 11.2
NKRFO15226 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.54■■□□□ 1.21e-15■□□□□ 11.2
NKRFO15226 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC22.14■■□□□ 1.131e-15■□□□□ 11.2
NKRFO15226 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.096e-9■□□□□ 11.2
NKRFO15226 PHKA2-204ENST00000469645 728 ntTSL 520.75■□□□□ 0.911e-12■□□□□ 11.2
NKRFO15226 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.581e-12■□□□□ 11.2
NKRFO15226 UBA2-205ENST00000590048 847 ntTSL 317.21■□□□□ 0.356e-9■□□□□ 11.2
Retrieved 100 of 9,198 protein–RNA pairs in 53.8 ms