RNA–Protein interactions for RNA: ENST00000513720.5

AFP-205, Transcript of alpha fetoprotein, humanhuman

TSL 1 (best)

Gene AFP, Length 197 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-205ENST00000513720 SLC24A1O60721 1099 aa7.61□□□□□ -1.19
AFP-205ENST00000513720 MYT1Q01538 1121 aa7.55□□□□□ -1.2
AFP-205ENST00000513720 PELP1Q8IZL8 1130 aaKnown RBP7.42□□□□□ -1.22
AFP-205ENST00000513720 TTBK1Q5TCY1 1321 aaPredicted RBP7.37□□□□□ -1.23
AFP-205ENST00000513720 ERICH6Q7L0X2 663 aa7.14□□□□□ -1.27
AFP-205ENST00000513720 DAXXQ9UER7 740 aaPredicted RBP7.09□□□□□ -1.27
AFP-205ENST00000513720 PRKCSHP14314 528 aaPredicted RBP6.93□□□□□ -1.3
AFP-205ENST00000513720 APLP2Q06481 763 aa6.93□□□□□ -1.3
AFP-205ENST00000513720 NCBP3Q53F19 620 aaKnown RBP6.75□□□□□ -1.33
AFP-205ENST00000513720 EHMT2Q96KQ7 1210 aa6.74□□□□□ -1.33
AFP-205ENST00000513720 RANGAP1P46060 587 aaPredicted RBP6.7□□□□□ -1.34
AFP-205ENST00000513720 EIF5BO60841 1220 aaKnown RBP6.64□□□□□ -1.35
AFP-205ENST00000513720 ARXQ96QS3 562 aa6.61□□□□□ -1.35
AFP-205ENST00000513720 RTN4Q9NQC3 1192 aaKnown RBP6.59□□□□□ -1.35
AFP-205ENST00000513720 PLPPR3Q6T4P5 718 aa6.55□□□□□ -1.36
AFP-205ENST00000513720 AMER1Q5JTC6 1135 aaPredicted RBP6.53□□□□□ -1.36
AFP-205ENST00000513720 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
AFP-205ENST00000513720 HOMEZQ8IX15 550 aa6.44□□□□□ -1.38
AFP-205ENST00000513720 TIMELESSQ9UNS1 1208 aa6.39□□□□□ -1.39
AFP-205ENST00000513720 TULP1O00294 542 aaPredicted RBP6.34□□□□□ -1.39
AFP-205ENST00000513720 KLHL34Q8N239 644 aa6.3□□□□□ -1.4
AFP-205ENST00000513720 PODXL2Q9NZ53 605 aa6.3□□□□□ -1.4
AFP-205ENST00000513720 AEBP2Q6ZN18 517 aaPredicted RBP6.29□□□□□ -1.4
AFP-205ENST00000513720 FAM9AQ8IZU1 332 aaPredicted RBP6.29□□□□□ -1.4
AFP-205ENST00000513720 CHIC1Q5VXU3 224 aa6.28□□□□□ -1.4
AFP-205ENST00000513720 PLEKHG5O94827 1062 aa6.26□□□□□ -1.41
AFP-205ENST00000513720 TAOK2Q9UL54 1235 aa6.24□□□□□ -1.41
AFP-205ENST00000513720 KCNA4P22459 653 aa6.23□□□□□ -1.41
AFP-205ENST00000513720 CENPBP07199 599 aaPredicted RBP6.22□□□□□ -1.41
AFP-205ENST00000513720 NPM2Q86SE8 214 aaKnown RBP6.21□□□□□ -1.42
AFP-205ENST00000513720 BCANQ96GW7 911 aa6.21□□□□□ -1.42
AFP-205ENST00000513720 TPRNQ4KMQ1 711 aa6.18□□□□□ -1.42
AFP-205ENST00000513720 DCAF8L2P0C7V8 631 aa6.17□□□□□ -1.42
AFP-205ENST00000513720 UBE2Q2Q8WVN8 375 aa6.17□□□□□ -1.42
AFP-205ENST00000513720 NEFLP07196 543 aa6.15□□□□□ -1.42
AFP-205ENST00000513720 C14orf37Q86TY3 774 aa6.13□□□□□ -1.43
AFP-205ENST00000513720 GTF3C3Q9Y5Q9 886 aa6.13□□□□□ -1.43
AFP-205ENST00000513720 PDIA4P13667 645 aaKnown RBP6.12□□□□□ -1.43
AFP-205ENST00000513720 FBXO3Q9UK99 471 aa6.1□□□□□ -1.43
AFP-205ENST00000513720 CSRNP3Q8WYN3 585 aa6.08□□□□□ -1.44
AFP-205ENST00000513720 PDE4CQ08493 712 aa6.07□□□□□ -1.44
AFP-205ENST00000513720 PKNOX2Q96KN3 472 aa6.07□□□□□ -1.44
AFP-205ENST00000513720 SCAF1Q9H7N4 1312 aaKnown RBP6.02□□□□□ -1.45
AFP-205ENST00000513720 CDK11BP21127 795 aaKnown RBP6.01□□□□□ -1.45
AFP-205ENST00000513720 HAP1P54257 671 aaPredicted RBP6.01□□□□□ -1.45
AFP-205ENST00000513720 TAF7LQ5H9L4 462 aa6.01□□□□□ -1.45
AFP-205ENST00000513720 CDK11AQ9UQ88 783 aaPredicted RBP6.01□□□□□ -1.45
AFP-205ENST00000513720 HRCP23327 699 aa5.99□□□□□ -1.45
AFP-205ENST00000513720 ANP32EQ9BTT0 268 aa5.98□□□□□ -1.45
AFP-205ENST00000513720 BRD2P25440 801 aaKnown RBP5.95□□□□□ -1.46
AFP-205ENST00000513720 PLCB2Q00722 1185 aa5.95□□□□□ -1.46
AFP-205ENST00000513720 TMEM132AQ24JP5 1023 aa5.95□□□□□ -1.46
AFP-205ENST00000513720 CHMP4AQ9BY43 222 aa5.95□□□□□ -1.46
AFP-205ENST00000513720 ZNF326Q5BKZ1 582 aaKnown RBP5.93□□□□□ -1.46
AFP-205ENST00000513720 HMGB1P09429 215 aaKnown RBP5.92□□□□□ -1.46
AFP-205ENST00000513720 HSP90B1P14625 803 aaKnown RBP5.91□□□□□ -1.46
AFP-205ENST00000513720 TRIM26Q12899 539 aaPredicted RBP5.91□□□□□ -1.46
AFP-205ENST00000513720 CNKSR2Q8WXI2 1034 aa5.88□□□□□ -1.47
AFP-205ENST00000513720 ANO8Q9HCE9 1232 aaPredicted RBP5.88□□□□□ -1.47
AFP-205ENST00000513720 LOC105371045A0A1W2PR82 267 aa5.87□□□□□ -1.47
AFP-205ENST00000513720 GLIPR1L2Q4G1C9 344 aa5.87□□□□□ -1.47
AFP-205ENST00000513720 CLSPNQ9HAW4 1339 aa5.87□□□□□ -1.47
AFP-205ENST00000513720 SUPT5HO00267 1087 aaKnown RBP5.86□□□□□ -1.47
AFP-205ENST00000513720 FGD1P98174 961 aa5.86□□□□□ -1.47
AFP-205ENST00000513720 ERICH6BQ5W0A0 696 aa5.86□□□□□ -1.47
AFP-205ENST00000513720 BCL11BQ9C0K0 894 aaPredicted RBP5.86□□□□□ -1.47
AFP-205ENST00000513720 SAMD1Q6SPF0 538 aaPredicted RBP5.85□□□□□ -1.47
AFP-205ENST00000513720 DHX37Q8IY37 1157 aaKnown RBP5.85□□□□□ -1.47
AFP-205ENST00000513720 POLR3GLQ9BT43 218 aa5.85□□□□□ -1.47
AFP-205ENST00000513720 SHROOM4Q9ULL8 1493 aa5.84□□□□□ -1.47
AFP-205ENST00000513720 ZEB1P37275 1124 aaPredicted RBP5.83□□□□□ -1.48
AFP-205ENST00000513720 POTEDQ86YR6 584 aa5.83□□□□□ -1.48
AFP-205ENST00000513720 MYT1LQ9UL68 1186 aa5.81□□□□□ -1.48
AFP-205ENST00000513720 BCCIPQ9P287 314 aaKnown RBP eCLIP5.8□□□□□ -1.48
AFP-205ENST00000513720 VSIG10Q8N0Z9 540 aa5.79□□□□□ -1.48
AFP-205ENST00000513720 SLC4A1APQ9BWU0 796 aaKnown RBP5.79□□□□□ -1.48
AFP-205ENST00000513720 UBTFP17480 764 aaKnown RBP5.78□□□□□ -1.48
AFP-205ENST00000513720 NAP1L5Q96NT1 182 aaPredicted RBP5.77□□□□□ -1.49
AFP-205ENST00000513720 ACIN1Q9UKV3 1341 aaKnown RBP5.76□□□□□ -1.49
AFP-205ENST00000513720 CCDC9Q9Y3X0 531 aaKnown RBP5.76□□□□□ -1.49
AFP-205ENST00000513720 RSPH4AQ5TD94 716 aa5.75□□□□□ -1.49
AFP-205ENST00000513720 A0A0U1RQG5 324 aaPredicted RBP5.74□□□□□ -1.49
AFP-205ENST00000513720 CCDC136Q96JN2 1154 aa5.74□□□□□ -1.49
AFP-205ENST00000513720 AAMPQ13685 434 aa5.72□□□□□ -1.49
AFP-205ENST00000513720 PAXIP1Q6ZW49 1069 aaPredicted RBP5.71□□□□□ -1.5
AFP-205ENST00000513720 RSPH6AQ9H0K4 717 aa5.7□□□□□ -1.5
AFP-205ENST00000513720 YTHDC1Q96MU7 727 aaKnown RBP5.69□□□□□ -1.5
AFP-205ENST00000513720 RBM10P98175 930 aaKnown RBP5.68□□□□□ -1.5
AFP-205ENST00000513720 PUS7Q96PZ0 661 aaKnown RBP5.68□□□□□ -1.5
AFP-205ENST00000513720 SALL2Q9Y467 1007 aaPredicted RBP5.68□□□□□ -1.5
AFP-205ENST00000513720 IGSF3O75054 1194 aa5.67□□□□□ -1.5
AFP-205ENST00000513720 DEKP35659 375 aaKnown RBP5.65□□□□□ -1.5
AFP-205ENST00000513720 TICAM2Q86XR7 235 aa5.65□□□□□ -1.5
AFP-205ENST00000513720 NCLP19338 710 aaKnown RBP5.64□□□□□ -1.51
AFP-205ENST00000513720 ZBTB7CA1YPR0 619 aa5.63□□□□□ -1.51
AFP-205ENST00000513720 CLSTN1O94985 981 aa5.63□□□□□ -1.51
AFP-205ENST00000513720 ARID3AQ99856 593 aa5.63□□□□□ -1.51
AFP-205ENST00000513720 IRX6P78412 446 aaPredicted RBP5.62□□□□□ -1.51
AFP-205ENST00000513720 CFAP44Q96MT7 982 aa5.62□□□□□ -1.51
AFP-205ENST00000513720 PHF23Q9BUL5 403 aaPredicted RBP5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms