Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC17.95■□□□□ 0.46
CCL21O00585 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 ST8SIA1-204ENST00000404299 1920 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.94■□□□□ 0.46
CCL21O00585 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
CCL21O00585 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL21O00585 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC17.94■□□□□ 0.46
CCL21O00585 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL21O00585 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.94■□□□□ 0.46
CCL21O00585 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCL21O00585 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
CCL21O00585 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 CASK-201ENST00000378154 2494 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL21O00585 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL21O00585 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.93■□□□□ 0.46
CCL21O00585 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC17.93■□□□□ 0.46
CCL21O00585 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC17.93■□□□□ 0.46
CCL21O00585 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.93■□□□□ 0.46
CCL21O00585 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.93■□□□□ 0.46
CCL21O00585 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC17.93■□□□□ 0.46
CCL21O00585 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCL21O00585 SMIM11B-205ENST00000624304 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 ARMC10P1-201ENST00000313754 855 ntBASIC17.92■□□□□ 0.46
CCL21O00585 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCL21O00585 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC17.92■□□□□ 0.46
CCL21O00585 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.92■□□□□ 0.46
CCL21O00585 AC242852.2-201ENST00000615738 1807 ntBASIC17.92■□□□□ 0.46
CCL21O00585 GOLGA2P6-201ENST00000340929 2049 ntBASIC17.92■□□□□ 0.46
CCL21O00585 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCL21O00585 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.92■□□□□ 0.46
CCL21O00585 CENPB-201ENST00000379751 2840 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
CCL21O00585 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
CCL21O00585 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL21O00585 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL21O00585 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
CCL21O00585 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.91■□□□□ 0.46
CCL21O00585 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL21O00585 AC023632.3-201ENST00000521633 145 ntBASIC17.91■□□□□ 0.46
CCL21O00585 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC17.91■□□□□ 0.46
CCL21O00585 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
CCL21O00585 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC17.91■□□□□ 0.46
CCL21O00585 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL21O00585 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.91■□□□□ 0.46
CCL21O00585 AC073195.1-201ENST00000607241 877 ntBASIC17.91■□□□□ 0.46
CCL21O00585 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 TPM4-201ENST00000300933 2666 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
CCL21O00585 AC124283.5-201ENST00000624661 1809 ntBASIC17.91■□□□□ 0.46
CCL21O00585 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC17.9■□□□□ 0.46
CCL21O00585 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
CCL21O00585 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 GPR137B-202ENST00000366592 2042 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCL21O00585 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC17.9■□□□□ 0.46
CCL21O00585 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms