Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDC7O00311 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDC7O00311 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDC7O00311 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CDC7O00311 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC19.91■□□□□ 0.78
CDC7O00311 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.9■□□□□ 0.78
CDC7O00311 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 CYP21A1P-202ENST00000354927 1481 ntBASIC19.9■□□□□ 0.78
CDC7O00311 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 DPP3P2-201ENST00000416030 1696 ntBASIC19.9■□□□□ 0.78
CDC7O00311 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.9■□□□□ 0.78
CDC7O00311 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC19.9■□□□□ 0.78
CDC7O00311 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDC7O00311 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC19.9■□□□□ 0.78
CDC7O00311 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
CDC7O00311 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.78
CDC7O00311 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
CDC7O00311 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
CDC7O00311 ANTXR1-202ENST00000409349 1384 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 AC068338.2-201ENST00000563278 1430 ntBASIC19.89■□□□□ 0.77
CDC7O00311 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDC7O00311 AL162412.1-201ENST00000567129 965 ntBASIC19.89■□□□□ 0.77
CDC7O00311 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.89■□□□□ 0.77
CDC7O00311 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.89■□□□□ 0.77
CDC7O00311 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC19.88■□□□□ 0.77
CDC7O00311 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.88■□□□□ 0.77
CDC7O00311 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 CCDC63-201ENST00000308208 1993 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
CDC7O00311 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 AC087633.2-202ENST00000565166 1439 ntBASIC19.88■□□□□ 0.77
CDC7O00311 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
CDC7O00311 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC19.88■□□□□ 0.77
CDC7O00311 PBX1-209ENST00000485769 834 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC19.88■□□□□ 0.77
CDC7O00311 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 AL356652.1-201ENST00000615962 565 ntBASIC19.88■□□□□ 0.77
CDC7O00311 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDC7O00311 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.88■□□□□ 0.77
CDC7O00311 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC7O00311 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC7O00311 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
CDC7O00311 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC7O00311 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
CDC7O00311 AC022517.1-201ENST00000592429 346 ntBASIC19.87■□□□□ 0.77
CDC7O00311 AC008750.8-201ENST00000600067 551 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
CDC7O00311 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.87■□□□□ 0.77
CDC7O00311 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.87■□□□□ 0.77
CDC7O00311 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
CDC7O00311 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19.87■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms