Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRRM4A7MD48 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC16.33■□□□□ 0.2
SRRM4A7MD48 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
SRRM4A7MD48 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC16.32■□□□□ 0.2
SRRM4A7MD48 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC16.32■□□□□ 0.2
SRRM4A7MD48 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC16.32■□□□□ 0.2
SRRM4A7MD48 MFSD11-216ENST00000590393 1141 ntBASIC16.32■□□□□ 0.2
SRRM4A7MD48 FAM21FP-204ENST00000608637 956 ntBASIC16.32■□□□□ 0.2
SRRM4A7MD48 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC16.32■□□□□ 0.2
SRRM4A7MD48 WWOX-218ENST00000627394 894 ntTSL 5 BASIC16.32■□□□□ 0.2
SRRM4A7MD48 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRRM4A7MD48 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 EEF1DP3-201ENST00000428783 1309 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 CASP6-205ENST00000505486 538 ntTSL 4 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 AC016405.3-201ENST00000607710 860 ntBASIC16.31■□□□□ 0.2
SRRM4A7MD48 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRRM4A7MD48 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC16.31■□□□□ 0.2
SRRM4A7MD48 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 AC008687.4-201ENST00000637680 1485 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 AC007322.4-201ENST00000509611 723 ntBASIC16.3■□□□□ 0.2
SRRM4A7MD48 AP001972.3-201ENST00000530792 495 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 AC011767.1-201ENST00000617410 1153 ntBASIC16.3■□□□□ 0.2
SRRM4A7MD48 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SRRM4A7MD48 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 DPP3P2-201ENST00000416030 1696 ntBASIC16.3■□□□□ 0.2
SRRM4A7MD48 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC16.3■□□□□ 0.2
SRRM4A7MD48 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 DUX4L16-201ENST00000555130 1264 ntBASIC16.29■□□□□ 0.2
SRRM4A7MD48 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 AC013268.1-206ENST00000638368 961 ntBASIC16.29■□□□□ 0.2
SRRM4A7MD48 AC112229.1-201ENST00000639295 961 ntBASIC16.29■□□□□ 0.2
SRRM4A7MD48 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 ST6GAL2-203ENST00000409087 1657 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.29■□□□□ 0.2
SRRM4A7MD48 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SRRM4A7MD48 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms