Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CTU2-210ENST00000567949 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ADAP1-218ENST00000617043 1946 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MAMSTR-202ENST00000356751 1825 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 MIPEPP3-201ENST00000412105 444 ntBASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PBX1-209ENST00000485769 834 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.27■□□□□ 0.2
TCRBV4S1A1TA0A5B7 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AIRN-201ENST00000601203 4374 ntBASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AL512625.2-201ENST00000417533 625 ntBASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC243732.1-201ENST00000612648 864 ntBASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC007225.1-201ENST00000566331 1836 ntBASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
TCRBV4S1A1TA0A5B7 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC073210.2-201ENST00000430369 194 ntBASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC245052.3-201ENST00000450182 901 ntBASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC093787.1-201ENST00000450396 207 ntBASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 LYSMD2-201ENST00000267838 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AC027702.1-201ENST00000563810 1770 ntBASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 ABHD17AP1-201ENST00000358206 933 ntBASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 BX276092.2-201ENST00000417668 665 ntBASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 AL162412.1-201ENST00000567129 965 ntBASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
TCRBV4S1A1TA0A5B7 CNTNAP3B-212ENST00000617422 2170 ntTSL 2 BASIC16.24■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms