Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.38
TRAV18A0A075B6X5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 HDHD5-203ENST00000399852 1118 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 GUSBP5-201ENST00000418136 578 ntBASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 AC126544.1-201ENST00000580842 1059 ntBASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 TMC6-218ENST00000591436 1155 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 THOC3-201ENST00000265097 1589 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 SH3BGRL3-201ENST00000270792 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TRAV18A0A075B6X5 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 AC053503.5-201ENST00000601508 636 ntBASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 DPF1-201ENST00000355526 1632 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 GAS8-202ENST00000536122 1687 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TRAV18A0A075B6X5 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 IGHV3-19-201ENST00000521488 291 ntBASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 EEF1DP3-203ENST00000566025 782 ntBASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
TRAV18A0A075B6X5 PHOSPHO1-206ENST00000514112 1587 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TRABD-204ENST00000395829 1628 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 AC004408.2-201ENST00000623613 2777 ntBASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TRAV18A0A075B6X5 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms