Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AP000944.1-201ENST00000533886 564 ntTSL 4 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC138331.1-201ENST00000549993 376 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 PCED1B-AS1-206ENST00000550426 683 ntTSL 5 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC089998.4-201ENST00000552532 459 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 PCED1B-AS1-211ENST00000552990 654 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 LINC00929-205ENST00000557672 514 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC013452.2-201ENST00000557910 743 ntTSL 5 BASIC8.61□□□□□ -1.03
SLC1A1P43005 TEFM-204ENST00000580840 2109 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC004253.1-201ENST00000583236 488 ntTSL 5 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC022148.2-201ENST00000586176 560 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC060766.7-201ENST00000587012 1212 ntTSL 3 BASIC8.61□□□□□ -1.03
SLC1A1P43005 BICRA-AS1-201ENST00000598376 547 ntTSL 4 BASIC8.61□□□□□ -1.03
SLC1A1P43005 RN7SL715P-201ENST00000606972 286 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC016876.3-201ENST00000610459 426 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC244153.1-201ENST00000617990 702 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 Metazoa_SRP.58-201ENST00000618720 282 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 AC244093.5-201ENST00000619606 718 ntTSL 4 BASIC8.61□□□□□ -1.03
SLC1A1P43005 ASAH1-229ENST00000636537 1056 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 AC079602.4-201ENST00000637836 532 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 VLDLR-AS1-201ENST00000416826 3167 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 KAT14-206ENST00000489634 3152 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 CDK19-201ENST00000323817 6067 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 FBXW7-207ENST00000603841 2261 ntAPPRIS P4 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 CARF-216ENST00000444724 2854 ntTSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 AL139811.2-201ENST00000373465 1630 ntBASIC8.61□□□□□ -1.03
SLC1A1P43005 NAALAD2-204ENST00000525171 1613 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 SLC22A10-201ENST00000332793 2026 ntAPPRIS P1 TSL 1 (best) BASIC8.61□□□□□ -1.03
SLC1A1P43005 FLG-AS1-202ENST00000392688 2995 ntTSL 2 BASIC8.61□□□□□ -1.03
SLC1A1P43005 ANKS1B-215ENST00000549493 3328 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 AC060780.1-202ENST00000590740 5084 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 ABCA17P-204ENST00000494925 3478 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AC008937.3-201ENST00000606813 1700 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AC016251.1-201ENST00000624299 4198 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 RPL4P3-201ENST00000428881 1311 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 PSMC1P12-201ENST00000436509 1314 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AC093616.1-201ENST00000427434 2095 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 CBFA2T2-209ENST00000492345 7803 ntTSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 NUSAP1-210ENST00000560177 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 MAGT1-205ENST00000618282 2788 ntAPPRIS ALT1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 OR2A5-202ENST00000641693 8681 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AL513318.2-201ENST00000602579 2012 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 PVALB-201ENST00000216200 595 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 TRAPPC3L-202ENST00000368602 1113 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 KRBOX1-201ENST00000383748 674 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 MIR595-201ENST00000384905 96 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 TIMD4-202ENST00000406964 581 ntTSL 2 BASIC8.6□□□□□ -1.03
SLC1A1P43005 GLS-205ENST00000409626 997 ntTSL 2 BASIC8.6□□□□□ -1.03
SLC1A1P43005 CYP4F62P-201ENST00000417310 524 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AC007036.1-201ENST00000430537 674 ntTSL 3 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AC112907.1-201ENST00000434957 540 ntTSL 4 BASIC8.6□□□□□ -1.03
SLC1A1P43005 WDR82P1-201ENST00000439836 939 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AL772284.1-201ENST00000443421 905 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AL034397.1-201ENST00000456392 908 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 RN7SL856P-201ENST00000461754 298 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AC108688.1-201ENST00000485817 713 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AC079795.1-201ENST00000508847 358 ntTSL 3 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AP002026.1-205ENST00000509295 915 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 IGHVII-15-1-201ENST00000517931 220 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AC100849.2-201ENST00000518324 519 ntTSL 2 BASIC8.6□□□□□ -1.03
SLC1A1P43005 PSAT1P1-201ENST00000518968 1106 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 AC087286.4-201ENST00000558757 746 ntTSL 3 BASIC8.6□□□□□ -1.03
SLC1A1P43005 BMF-210ENST00000561360 735 ntAPPRIS P1 TSL 3 BASIC8.6□□□□□ -1.03
SLC1A1P43005 PSG10P-202ENST00000597171 1283 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 OR1X1P-201ENST00000606159 931 ntBASIC8.6□□□□□ -1.03
SLC1A1P43005 LINC00837-203ENST00000608061 555 ntTSL 4 BASIC8.6□□□□□ -1.03
SLC1A1P43005 PLEKHM3-202ENST00000427836 9807 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 BCAT1-202ENST00000342945 4319 ntTSL 2 BASIC8.6□□□□□ -1.03
SLC1A1P43005 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC8.6□□□□□ -1.03
SLC1A1P43005 STAMBP-201ENST00000339566 6277 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AL138756.1-201ENST00000563434 4488 ntTSL 2 BASIC8.6□□□□□ -1.03
SLC1A1P43005 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 ABCA9-207ENST00000495634 1428 ntTSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 KCNMA1-214ENST00000434208 4055 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 ZNF793-201ENST00000445217 6712 ntAPPRIS P1 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 C8orf37-201ENST00000286688 3334 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 EPHB2-201ENST00000374627 4014 ntAPPRIS ALT2 TSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AC004148.2-201ENST00000575890 1938 ntTSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 SMIM31-201ENST00000507311 3123 ntAPPRIS P1 TSL 1 (best) BASIC8.6□□□□□ -1.03
SLC1A1P43005 SOX5-202ENST00000381381 3991 ntTSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 AF127936.2-201ENST00000455253 1724 ntTSL 5 BASIC8.6□□□□□ -1.03
SLC1A1P43005 LINC00955-202ENST00000514422 1502 ntTSL 4 BASIC8.59□□□□□ -1.03
SLC1A1P43005 MATR3-232ENST00000502929 4373 ntTSL 2 BASIC8.59□□□□□ -1.03
SLC1A1P43005 PARP1P1-201ENST00000413631 3026 ntBASIC8.59□□□□□ -1.03
SLC1A1P43005 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SLC1A1P43005 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.59□□□□□ -1.03
SLC1A1P43005 GABRP-203ENST00000518525 3576 ntAPPRIS P1 TSL 5 BASIC8.59□□□□□ -1.03
SLC1A1P43005 TDGF1P3-202ENST00000602699 2710 ntBASIC8.59□□□□□ -1.03
SLC1A1P43005 RNA5SP336-201ENST00000364189 117 ntBASIC8.59□□□□□ -1.03
SLC1A1P43005 MAGOH-201ENST00000371466 500 ntTSL 2 BASIC8.59□□□□□ -1.03
SLC1A1P43005 SMIM30-201ENST00000397764 1070 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SLC1A1P43005 SMIM2-201ENST00000400419 822 ntAPPRIS P1 TSL 1 (best) BASIC8.59□□□□□ -1.03
SLC1A1P43005 CNOT4P1-201ENST00000417432 1199 ntBASIC8.59□□□□□ -1.03
SLC1A1P43005 AP000317.1-201ENST00000427022 805 ntTSL 3 BASIC8.59□□□□□ -1.03
SLC1A1P43005 LDHAP3-201ENST00000448312 1008 ntBASIC8.59□□□□□ -1.03
Retrieved 100 of 98,524 protein–RNA pairs in 65.5 ms