RNA–Protein interactions for RNA: ENST00000580840.1

TEFM-204, Transcript of transcription elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TEFM, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TEFM-204ENST00000580840 AEBP2Q6ZN18 517 aaPredicted RBP15.43■□□□□ 0.06
TEFM-204ENST00000580840 PELP1Q8IZL8 1130 aaKnown RBP14.55□□□□□ -0.08
TEFM-204ENST00000580840 NISCHQ9Y2I1 1504 aa14.54□□□□□ -0.08
TEFM-204ENST00000580840 CHIC1Q5VXU3 224 aa14.29□□□□□ -0.12
TEFM-204ENST00000580840 MYT1Q01538 1121 aa14.26□□□□□ -0.13
TEFM-204ENST00000580840 HRCP23327 699 aa14.04□□□□□ -0.16
TEFM-204ENST00000580840 TTBK1Q5TCY1 1321 aaPredicted RBP13.6□□□□□ -0.23
TEFM-204ENST00000580840 POTEDQ86YR6 584 aa13.48□□□□□ -0.25
TEFM-204ENST00000580840 SCAF1Q9H7N4 1312 aaKnown RBP13.38□□□□□ -0.27
TEFM-204ENST00000580840 PPARGC1BQ86YN6 1023 aaKnown RBP13.37□□□□□ -0.27
TEFM-204ENST00000580840 PCGF6Q9BYE7 350 aa13.31□□□□□ -0.28
TEFM-204ENST00000580840 ZEB1P37275 1124 aaPredicted RBP13.27□□□□□ -0.28
TEFM-204ENST00000580840 SENP3Q9H4L4 574 aaPredicted RBP13.24□□□□□ -0.29
TEFM-204ENST00000580840 DCAF1Q9Y4B6 1507 aa13.22□□□□□ -0.29
TEFM-204ENST00000580840 CCDC180Q9P1Z9 1646 aa13.12□□□□□ -0.31
TEFM-204ENST00000580840 MYO15BQ96JP2 1530 aa13.1□□□□□ -0.31
TEFM-204ENST00000580840 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
TEFM-204ENST00000580840 TRIM26Q12899 539 aaPredicted RBP13.03□□□□□ -0.32
TEFM-204ENST00000580840 CENPBP07199 599 aaPredicted RBP12.94□□□□□ -0.34
TEFM-204ENST00000580840 PHF23Q9BUL5 403 aaPredicted RBP12.94□□□□□ -0.34
TEFM-204ENST00000580840 NEUROD1Q13562 356 aa12.85□□□□□ -0.35
TEFM-204ENST00000580840 GTF3C3Q9Y5Q9 886 aa12.85□□□□□ -0.35
TEFM-204ENST00000580840 BCL11AQ9H165 835 aa12.79□□□□□ -0.36
TEFM-204ENST00000580840 SUPT5HO00267 1087 aaKnown RBP12.77□□□□□ -0.37
TEFM-204ENST00000580840 ERICH6Q7L0X2 663 aa12.7□□□□□ -0.38
TEFM-204ENST00000580840 ANP32EQ9BTT0 268 aa12.61□□□□□ -0.39
TEFM-204ENST00000580840 SHROOM4Q9ULL8 1493 aa12.61□□□□□ -0.39
TEFM-204ENST00000580840 PRKCSHP14314 528 aaPredicted RBP12.61□□□□□ -0.39
TEFM-204ENST00000580840 CLSPNQ9HAW4 1339 aa12.59□□□□□ -0.39
TEFM-204ENST00000580840 FAM9AQ8IZU1 332 aaPredicted RBP12.59□□□□□ -0.39
TEFM-204ENST00000580840 DIEXFQ68CQ4 756 aaKnown RBP12.55□□□□□ -0.4
TEFM-204ENST00000580840 FOXD1Q16676 465 aa12.51□□□□□ -0.41
TEFM-204ENST00000580840 APLP2Q06481 763 aa12.47□□□□□ -0.41
TEFM-204ENST00000580840 LOC105371045A0A1W2PR82 267 aa12.46□□□□□ -0.41
TEFM-204ENST00000580840 ZCCHC6Q5VYS8 1495 aaKnown RBP12.44□□□□□ -0.42
TEFM-204ENST00000580840 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
TEFM-204ENST00000580840 CSRNP3Q8WYN3 585 aa12.31□□□□□ -0.44
TEFM-204ENST00000580840 CCER1Q8TC90 406 aaPredicted RBP12.28□□□□□ -0.44
TEFM-204ENST00000580840 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.45
TEFM-204ENST00000580840 TSHZ2Q9NRE2 1034 aa12.26□□□□□ -0.45
TEFM-204ENST00000580840 MYT1LQ9UL68 1186 aa12.22□□□□□ -0.45
TEFM-204ENST00000580840 SUPT16HQ9Y5B9 1047 aaKnown RBP12.19□□□□□ -0.46
TEFM-204ENST00000580840 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.15□□□□□ -0.46
TEFM-204ENST00000580840 YTHDC1Q96MU7 727 aaKnown RBP12.14□□□□□ -0.47
TEFM-204ENST00000580840 MIER1Q8N108 512 aa12.09□□□□□ -0.47
TEFM-204ENST00000580840 MSH5O43196 834 aa12.03□□□□□ -0.48
TEFM-204ENST00000580840 ERICH6BQ5W0A0 696 aa12.02□□□□□ -0.48
TEFM-204ENST00000580840 RBM19Q9Y4C8 960 aaKnown RBP11.93□□□□□ -0.5
TEFM-204ENST00000580840 WRNQ14191 1432 aaPredicted RBP eCLIP11.93□□□□□ -0.5
TEFM-204ENST00000580840 FANCIQ9NVI1 1328 aa11.92□□□□□ -0.5
TEFM-204ENST00000580840 UBE2Q2Q8WVN8 375 aa11.92□□□□□ -0.5
TEFM-204ENST00000580840 ABCC9O60706 1549 aa11.87□□□□□ -0.51
TEFM-204ENST00000580840 ANO8Q9HCE9 1232 aaPredicted RBP11.82□□□□□ -0.52
TEFM-204ENST00000580840 DEKP35659 375 aaKnown RBP11.81□□□□□ -0.52
TEFM-204ENST00000580840 NEFLP07196 543 aa11.76□□□□□ -0.53
TEFM-204ENST00000580840 RB1CC1Q8TDY2 1594 aa11.73□□□□□ -0.53
TEFM-204ENST00000580840 FKBP8Q14318 412 aa11.71□□□□□ -0.53
TEFM-204ENST00000580840 DCAF8L2P0C7V8 631 aa11.68□□□□□ -0.54
TEFM-204ENST00000580840 RSF1Q96T23 1441 aaPredicted RBP11.67□□□□□ -0.54
TEFM-204ENST00000580840 SALL2Q9Y467 1007 aaPredicted RBP11.67□□□□□ -0.54
TEFM-204ENST00000580840 SLC24A1O60721 1099 aa11.66□□□□□ -0.54
TEFM-204ENST00000580840 EIF5BO60841 1220 aaKnown RBP11.66□□□□□ -0.54
TEFM-204ENST00000580840 CDK11AQ9UQ88 783 aaPredicted RBP11.65□□□□□ -0.54
TEFM-204ENST00000580840 BCANQ96GW7 911 aa11.63□□□□□ -0.55
TEFM-204ENST00000580840 DAXXQ9UER7 740 aaPredicted RBP11.59□□□□□ -0.55
TEFM-204ENST00000580840 CEP162Q5TB80 1403 aa11.58□□□□□ -0.56
TEFM-204ENST00000580840 TNIKQ9UKE5 1360 aa11.58□□□□□ -0.56
TEFM-204ENST00000580840 NOP58Q9Y2X3 529 aaKnown RBP11.54□□□□□ -0.56
TEFM-204ENST00000580840 PKNOX2Q96KN3 472 aa11.53□□□□□ -0.56
TEFM-204ENST00000580840 RTL5Q5HYW3 569 aaPredicted RBP11.53□□□□□ -0.56
TEFM-204ENST00000580840 CCER2I3L3R5 266 aa11.51□□□□□ -0.57
TEFM-204ENST00000580840 C11orf95C9JLR9 678 aaPredicted RBP11.51□□□□□ -0.57
TEFM-204ENST00000580840 CCDC136Q96JN2 1154 aa11.49□□□□□ -0.57
TEFM-204ENST00000580840 EEA1Q15075 1411 aa11.48□□□□□ -0.57
TEFM-204ENST00000580840 EHMT2Q96KQ7 1210 aa11.47□□□□□ -0.57
TEFM-204ENST00000580840 ITGAEP38570 1179 aa11.47□□□□□ -0.57
TEFM-204ENST00000580840 GLIPR1L2Q4G1C9 344 aa11.46□□□□□ -0.57
TEFM-204ENST00000580840 USP35Q9P2H5 1018 aa11.46□□□□□ -0.57
TEFM-204ENST00000580840 DHX57Q6P158 1386 aaKnown RBP11.44□□□□□ -0.58
TEFM-204ENST00000580840 EIF4G1Q04637 1599 aaKnown RBP11.43□□□□□ -0.58
TEFM-204ENST00000580840 WASHC2AQ641Q2 1341 aa11.43□□□□□ -0.58
TEFM-204ENST00000580840 PPP4R2Q9NY27 417 aa11.42□□□□□ -0.58
TEFM-204ENST00000580840 HNRNPUL2Q1KMD3 747 aaKnown RBP11.42□□□□□ -0.58
TEFM-204ENST00000580840 IL27Q8NEV9 243 aa11.42□□□□□ -0.58
TEFM-204ENST00000580840 RSPH6AQ9H0K4 717 aa11.42□□□□□ -0.58
TEFM-204ENST00000580840 WASHC2CQ9Y4E1 1318 aa11.4□□□□□ -0.58
TEFM-204ENST00000580840 NBR1Q14596 966 aa11.39□□□□□ -0.59
TEFM-204ENST00000580840 PIAS4Q8N2W9 510 aaPredicted RBP11.39□□□□□ -0.59
TEFM-204ENST00000580840 SCRIBQ14160 1630 aa11.39□□□□□ -0.59
TEFM-204ENST00000580840 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.39□□□□□ -0.59
TEFM-204ENST00000580840 KCNH8Q96L42 1107 aa11.38□□□□□ -0.59
TEFM-204ENST00000580840 IPO9Q96P70 1041 aaKnown RBP11.37□□□□□ -0.59
TEFM-204ENST00000580840 ANP32AP39687 249 aaKnown RBP11.36□□□□□ -0.59
TEFM-204ENST00000580840 CUX2O14529 1486 aa11.34□□□□□ -0.59
TEFM-204ENST00000580840 GOLGA3Q08378 1498 aa11.34□□□□□ -0.59
TEFM-204ENST00000580840 ZBTB47Q9UFB7 747 aaPredicted RBP11.34□□□□□ -0.59
TEFM-204ENST00000580840 BAZ1AQ9NRL2 1556 aaPredicted RBP11.34□□□□□ -0.59
TEFM-204ENST00000580840 ANP32CO43423 234 aa11.32□□□□□ -0.6
TEFM-204ENST00000580840 PAK3O75914 559 aaPredicted RBP11.32□□□□□ -0.6
TEFM-204ENST00000580840 NACADO15069 1562 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms