RNA–Protein interactions for RNA: ENST00000406964.5

TIMD4-202, Transcript of T cell immunoglobulin and mucin domain containing 4, humanhuman

TSL 2 BASIC

Gene TIMD4, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4-202ENST00000406964 AEBP2Q6ZN18 517 aaPredicted RBP24.99■■□□□ 1.59
TIMD4-202ENST00000406964 CHIC1Q5VXU3 224 aa24.58■■□□□ 1.53
TIMD4-202ENST00000406964 PHF23Q9BUL5 403 aaPredicted RBP21.58■■□□□ 1.05
TIMD4-202ENST00000406964 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
TIMD4-202ENST00000406964 PLPPR3Q6T4P5 718 aa20.03■□□□□ 0.8
TIMD4-202ENST00000406964 NISCHQ9Y2I1 1504 aa19.71■□□□□ 0.75
TIMD4-202ENST00000406964 FOXD1Q16676 465 aa19.67■□□□□ 0.74
TIMD4-202ENST00000406964 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
TIMD4-202ENST00000406964 ADRA2BP18089 450 aa18.96■□□□□ 0.63
TIMD4-202ENST00000406964 PIAS4Q8N2W9 510 aaPredicted RBP18.57■□□□□ 0.56
TIMD4-202ENST00000406964 MSH5O43196 834 aa18.18■□□□□ 0.5
TIMD4-202ENST00000406964 PPP4R3CPQ6ZMV5 832 aa17.62■□□□□ 0.41
TIMD4-202ENST00000406964 CCDC180Q9P1Z9 1646 aa17.5■□□□□ 0.39
TIMD4-202ENST00000406964 SCAF1Q9H7N4 1312 aaKnown RBP17.48■□□□□ 0.39
TIMD4-202ENST00000406964 KCNA4P22459 653 aa17.3■□□□□ 0.36
TIMD4-202ENST00000406964 NCBP3Q53F19 620 aaKnown RBP17.26■□□□□ 0.35
TIMD4-202ENST00000406964 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
TIMD4-202ENST00000406964 MAPK8IP2Q13387 824 aaPredicted RBP17.16■□□□□ 0.34
TIMD4-202ENST00000406964 CNKSR2Q8WXI2 1034 aa17.15■□□□□ 0.34
TIMD4-202ENST00000406964 DMRT2Q9Y5R5 561 aa17■□□□□ 0.31
TIMD4-202ENST00000406964 NPM3O75607 178 aaKnown RBP16.94■□□□□ 0.3
TIMD4-202ENST00000406964 RNF216Q9NWF9 866 aaPredicted RBP16.8■□□□□ 0.28
TIMD4-202ENST00000406964 ABCC9O60706 1549 aa16.73■□□□□ 0.27
TIMD4-202ENST00000406964 HOXD11P31277 338 aaPredicted RBP16.71■□□□□ 0.27
TIMD4-202ENST00000406964 DNAJC5BQ9UF47 199 aa16.59■□□□□ 0.25
TIMD4-202ENST00000406964 SLC4A1APQ9BWU0 796 aaKnown RBP16.52■□□□□ 0.24
TIMD4-202ENST00000406964 ZCCHC6Q5VYS8 1495 aaKnown RBP16.5■□□□□ 0.23
TIMD4-202ENST00000406964 DCAF1Q9Y4B6 1507 aa16.32■□□□□ 0.2
TIMD4-202ENST00000406964 NACADO15069 1562 aa16.3■□□□□ 0.2
TIMD4-202ENST00000406964 RB1CC1Q8TDY2 1594 aa16.27■□□□□ 0.2
TIMD4-202ENST00000406964 MYO15BQ96JP2 1530 aa16.26■□□□□ 0.19
TIMD4-202ENST00000406964 DCAF8L2P0C7V8 631 aa16.24■□□□□ 0.19
TIMD4-202ENST00000406964 DCAF8L1A6NGE4 600 aa16.15■□□□□ 0.18
TIMD4-202ENST00000406964 EHMT2Q96KQ7 1210 aa16.08■□□□□ 0.16
TIMD4-202ENST00000406964 UNC13AQ9UPW8 1703 aa16.06■□□□□ 0.16
TIMD4-202ENST00000406964 SCRIBQ14160 1630 aa15.97■□□□□ 0.15
TIMD4-202ENST00000406964 SLC4A2P04920 1241 aa15.96■□□□□ 0.15
TIMD4-202ENST00000406964 FOXD4L1Q9NU39 408 aa15.94■□□□□ 0.14
TIMD4-202ENST00000406964 CSRNP3Q8WYN3 585 aa15.93■□□□□ 0.14
TIMD4-202ENST00000406964 ZBTB22O15209 634 aa15.9■□□□□ 0.14
TIMD4-202ENST00000406964 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.86■□□□□ 0.13
TIMD4-202ENST00000406964 BICRAQ9NZM4 1560 aa15.77■□□□□ 0.11
TIMD4-202ENST00000406964 SHROOM4Q9ULL8 1493 aa15.73■□□□□ 0.11
TIMD4-202ENST00000406964 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
TIMD4-202ENST00000406964 PABPN1Q86U42 306 aaKnown RBP eCLIP15.61■□□□□ 0.09
TIMD4-202ENST00000406964 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
TIMD4-202ENST00000406964 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
TIMD4-202ENST00000406964 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
TIMD4-202ENST00000406964 RNF39Q9H2S5 420 aa15.55■□□□□ 0.08
TIMD4-202ENST00000406964 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
TIMD4-202ENST00000406964 ATXN8OSP0DMR3 200 aa15.46■□□□□ 0.07
TIMD4-202ENST00000406964 C1QBPQ07021 282 aaKnown RBP15.42■□□□□ 0.06
TIMD4-202ENST00000406964 APLP2Q06481 763 aa15.38■□□□□ 0.05
TIMD4-202ENST00000406964 EIF4G1Q04637 1599 aaKnown RBP15.32■□□□□ 0.04
TIMD4-202ENST00000406964 SMARCA4P51532 1647 aa15.3■□□□□ 0.04
TIMD4-202ENST00000406964 CECR2Q9BXF3 1484 aa15.3■□□□□ 0.04
TIMD4-202ENST00000406964 BAZ1AQ9NRL2 1556 aaPredicted RBP15.28■□□□□ 0.04
TIMD4-202ENST00000406964 CC2D2AQ9P2K1 1620 aa15.21■□□□□ 0.02
TIMD4-202ENST00000406964 MROH2BQ7Z745 1585 aa15.2■□□□□ 0.02
TIMD4-202ENST00000406964 ATF5Q9Y2D1 282 aaPredicted RBP15.17■□□□□ 0.02
TIMD4-202ENST00000406964 WIZO95785 1651 aa15.12■□□□□ 0.01
TIMD4-202ENST00000406964 PEG3Q9GZU2 1588 aa15.11■□□□□ 0.01
TIMD4-202ENST00000406964 SPINK5Q9NQ38 1064 aaPredicted RBP15.11■□□□□ 0.01
TIMD4-202ENST00000406964 ZNF219Q9P2Y4 722 aaPredicted RBP15.1■□□□□ 0.01
TIMD4-202ENST00000406964 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
TIMD4-202ENST00000406964 RSF1Q96T23 1441 aaPredicted RBP15.09■□□□□ 0.01
TIMD4-202ENST00000406964 CAPN15O75808 1086 aa15.06■□□□□ 0
TIMD4-202ENST00000406964 ATAD2BQ9ULI0 1458 aa15.05■□□□□ -0
TIMD4-202ENST00000406964 CACNB1Q02641 598 aaPredicted RBP15.03■□□□□ -0
TIMD4-202ENST00000406964 HMGXB3Q12766 1538 aa15.02□□□□□ -0.01
TIMD4-202ENST00000406964 TRHP20396 242 aaPredicted RBP15□□□□□ -0.01
TIMD4-202ENST00000406964 BAZ1BQ9UIG0 1483 aaKnown RBP14.98□□□□□ -0.01
TIMD4-202ENST00000406964 NCAPD3P42695 1498 aa14.96□□□□□ -0.01
TIMD4-202ENST00000406964 TOP2AP11388 1531 aaKnown RBP14.95□□□□□ -0.02
TIMD4-202ENST00000406964 SUPT5HO00267 1087 aaKnown RBP14.89□□□□□ -0.03
TIMD4-202ENST00000406964 DSG3P32926 999 aa14.82□□□□□ -0.04
TIMD4-202ENST00000406964 POLA2Q14181 598 aa14.82□□□□□ -0.04
TIMD4-202ENST00000406964 ABCB7O75027 752 aa14.74□□□□□ -0.05
TIMD4-202ENST00000406964 CCDC88BA6NC98 1476 aa14.7□□□□□ -0.06
TIMD4-202ENST00000406964 PRDM2Q13029 1718 aa14.69□□□□□ -0.06
TIMD4-202ENST00000406964 ZBTB12Q9Y330 459 aaPredicted RBP14.68□□□□□ -0.06
TIMD4-202ENST00000406964 LAMC3Q9Y6N6 1575 aa14.61□□□□□ -0.07
TIMD4-202ENST00000406964 FBLN2P98095 1184 aa14.61□□□□□ -0.07
TIMD4-202ENST00000406964 NESP48681 1621 aa14.58□□□□□ -0.08
TIMD4-202ENST00000406964 MKRN4PQ13434 485 aaPredicted RBP14.55□□□□□ -0.08
TIMD4-202ENST00000406964 CFTRP13569 1480 aa14.55□□□□□ -0.08
TIMD4-202ENST00000406964 KIF21AQ7Z4S6 1674 aa14.55□□□□□ -0.08
TIMD4-202ENST00000406964 CADPSQ9ULU8 1353 aa14.53□□□□□ -0.08
TIMD4-202ENST00000406964 FANCD2Q9BXW9 1451 aa14.43□□□□□ -0.1
TIMD4-202ENST00000406964 PDS5BQ9NTI5 1447 aa14.41□□□□□ -0.1
TIMD4-202ENST00000406964 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
TIMD4-202ENST00000406964 CEP164Q9UPV0 1460 aa14.39□□□□□ -0.11
TIMD4-202ENST00000406964 THOC2Q8NI27 1593 aaKnown RBP14.38□□□□□ -0.11
TIMD4-202ENST00000406964 FKBP8Q14318 412 aa14.37□□□□□ -0.11
TIMD4-202ENST00000406964 ABCC8Q09428 1581 aa14.34□□□□□ -0.11
TIMD4-202ENST00000406964 MRC2Q9UBG0 1479 aa14.31□□□□□ -0.12
TIMD4-202ENST00000406964 SPDYE4A6NLX3 237 aa14.3□□□□□ -0.12
TIMD4-202ENST00000406964 DNMBPQ6XZF7 1577 aa14.29□□□□□ -0.12
TIMD4-202ENST00000406964 WDR62O43379 1518 aa14.28□□□□□ -0.12
TIMD4-202ENST00000406964 URB2Q14146 1524 aaKnown RBP14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms