RNA–Protein interactions for RNA: ENST00000368602.3

TRAPPC3L-202, Transcript of trafficking protein particle complex 3 like, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TRAPPC3L, Length 1,113 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3L-202ENST00000368602 AEBP2Q6ZN18 517 aaPredicted RBP26.37■■□□□ 1.81
TRAPPC3L-202ENST00000368602 CHIC1Q5VXU3 224 aa25.27■■□□□ 1.64
TRAPPC3L-202ENST00000368602 SENP3Q9H4L4 574 aaPredicted RBP22.33■■□□□ 1.17
TRAPPC3L-202ENST00000368602 PHF23Q9BUL5 403 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC3L-202ENST00000368602 FOXD1Q16676 465 aa20.86■□□□□ 0.93
TRAPPC3L-202ENST00000368602 PLPPR3Q6T4P5 718 aa20.28■□□□□ 0.84
TRAPPC3L-202ENST00000368602 NISCHQ9Y2I1 1504 aa20.15■□□□□ 0.82
TRAPPC3L-202ENST00000368602 PPP6R1Q9UPN7 881 aa19.78■□□□□ 0.76
TRAPPC3L-202ENST00000368602 ADRA2BP18089 450 aa19.71■□□□□ 0.75
TRAPPC3L-202ENST00000368602 PIAS4Q8N2W9 510 aaPredicted RBP19.51■□□□□ 0.71
TRAPPC3L-202ENST00000368602 MSH5O43196 834 aa19.31■□□□□ 0.68
TRAPPC3L-202ENST00000368602 POTEDQ86YR6 584 aa18.56■□□□□ 0.56
TRAPPC3L-202ENST00000368602 ABCC9O60706 1549 aa18.49■□□□□ 0.55
TRAPPC3L-202ENST00000368602 CCDC180Q9P1Z9 1646 aa18.11■□□□□ 0.49
TRAPPC3L-202ENST00000368602 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
TRAPPC3L-202ENST00000368602 SCAF1Q9H7N4 1312 aaKnown RBP17.91■□□□□ 0.46
TRAPPC3L-202ENST00000368602 PPP4R3CPQ6ZMV5 832 aa17.86■□□□□ 0.45
TRAPPC3L-202ENST00000368602 DMRT2Q9Y5R5 561 aa17.79■□□□□ 0.44
TRAPPC3L-202ENST00000368602 DNAJC5BQ9UF47 199 aa17.54■□□□□ 0.4
TRAPPC3L-202ENST00000368602 CNKSR2Q8WXI2 1034 aa17.42■□□□□ 0.38
TRAPPC3L-202ENST00000368602 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
TRAPPC3L-202ENST00000368602 HOXD11P31277 338 aaPredicted RBP17.27■□□□□ 0.36
TRAPPC3L-202ENST00000368602 DCAF8L2P0C7V8 631 aa17.25■□□□□ 0.35
TRAPPC3L-202ENST00000368602 PABPN1Q86U42 306 aaKnown RBP eCLIP17.21■□□□□ 0.35
TRAPPC3L-202ENST00000368602 NCBP3Q53F19 620 aaKnown RBP17.19■□□□□ 0.34
TRAPPC3L-202ENST00000368602 RNF216Q9NWF9 866 aaPredicted RBP17.19■□□□□ 0.34
TRAPPC3L-202ENST00000368602 NACADO15069 1562 aa17.17■□□□□ 0.34
TRAPPC3L-202ENST00000368602 UNC13AQ9UPW8 1703 aa17.06■□□□□ 0.32
TRAPPC3L-202ENST00000368602 NPM3O75607 178 aaKnown RBP17.03■□□□□ 0.32
TRAPPC3L-202ENST00000368602 DCAF8L1A6NGE4 600 aa17.01■□□□□ 0.31
TRAPPC3L-202ENST00000368602 KCNA4P22459 653 aa16.99■□□□□ 0.31
TRAPPC3L-202ENST00000368602 BICRAQ9NZM4 1560 aa16.93■□□□□ 0.3
TRAPPC3L-202ENST00000368602 MYO15BQ96JP2 1530 aa16.78■□□□□ 0.28
TRAPPC3L-202ENST00000368602 ZCCHC6Q5VYS8 1495 aaKnown RBP16.66■□□□□ 0.26
TRAPPC3L-202ENST00000368602 SCRIBQ14160 1630 aa16.65■□□□□ 0.26
TRAPPC3L-202ENST00000368602 CC2D2AQ9P2K1 1620 aa16.63■□□□□ 0.25
TRAPPC3L-202ENST00000368602 CECR2Q9BXF3 1484 aa16.61■□□□□ 0.25
TRAPPC3L-202ENST00000368602 RNF39Q9H2S5 420 aa16.56■□□□□ 0.24
TRAPPC3L-202ENST00000368602 EIF4G1Q04637 1599 aaKnown RBP16.52■□□□□ 0.24
TRAPPC3L-202ENST00000368602 DCAF1Q9Y4B6 1507 aa16.52■□□□□ 0.24
TRAPPC3L-202ENST00000368602 SHROOM4Q9ULL8 1493 aa16.49■□□□□ 0.23
TRAPPC3L-202ENST00000368602 CACNB1Q02641 598 aaPredicted RBP16.41■□□□□ 0.22
TRAPPC3L-202ENST00000368602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.41■□□□□ 0.22
TRAPPC3L-202ENST00000368602 C1QBPQ07021 282 aaKnown RBP16.3■□□□□ 0.2
TRAPPC3L-202ENST00000368602 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
TRAPPC3L-202ENST00000368602 U3KPZ7 1027 aaPredicted RBP16.17■□□□□ 0.18
TRAPPC3L-202ENST00000368602 DNAJC5Q9H3Z4 198 aa16.13■□□□□ 0.17
TRAPPC3L-202ENST00000368602 SLC4A1APQ9BWU0 796 aaKnown RBP16.05■□□□□ 0.16
TRAPPC3L-202ENST00000368602 ERCC6Q03468 1493 aa15.92■□□□□ 0.14
TRAPPC3L-202ENST00000368602 CUX2O14529 1486 aa15.86■□□□□ 0.13
TRAPPC3L-202ENST00000368602 NCAPD3P42695 1498 aa15.86■□□□□ 0.13
TRAPPC3L-202ENST00000368602 SPINK5Q9NQ38 1064 aaPredicted RBP15.85■□□□□ 0.13
TRAPPC3L-202ENST00000368602 ATAD2BQ9ULI0 1458 aa15.84■□□□□ 0.13
TRAPPC3L-202ENST00000368602 NESP48681 1621 aa15.83■□□□□ 0.13
TRAPPC3L-202ENST00000368602 SMARCA4P51532 1647 aa15.79■□□□□ 0.12
TRAPPC3L-202ENST00000368602 CAPN15O75808 1086 aa15.75■□□□□ 0.11
TRAPPC3L-202ENST00000368602 SMARCA2P51531 1590 aa15.73■□□□□ 0.11
TRAPPC3L-202ENST00000368602 HMGXB3Q12766 1538 aa15.73■□□□□ 0.11
TRAPPC3L-202ENST00000368602 FOXD4L1Q9NU39 408 aa15.7■□□□□ 0.1
TRAPPC3L-202ENST00000368602 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
TRAPPC3L-202ENST00000368602 BAZ1BQ9UIG0 1483 aaKnown RBP15.69■□□□□ 0.1
TRAPPC3L-202ENST00000368602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.68■□□□□ 0.1
TRAPPC3L-202ENST00000368602 HNRNPUL2Q1KMD3 747 aaKnown RBP15.68■□□□□ 0.1
TRAPPC3L-202ENST00000368602 ZBTB22O15209 634 aa15.66■□□□□ 0.1
TRAPPC3L-202ENST00000368602 SAMD1Q6SPF0 538 aaPredicted RBP15.64■□□□□ 0.09
TRAPPC3L-202ENST00000368602 THOC2Q8NI27 1593 aaKnown RBP15.63■□□□□ 0.09
TRAPPC3L-202ENST00000368602 BAZ1AQ9NRL2 1556 aaPredicted RBP15.63■□□□□ 0.09
TRAPPC3L-202ENST00000368602 DSG3P32926 999 aa15.62■□□□□ 0.09
TRAPPC3L-202ENST00000368602 APLP2Q06481 763 aa15.6■□□□□ 0.09
TRAPPC3L-202ENST00000368602 MROH2BQ7Z745 1585 aa15.59■□□□□ 0.09
TRAPPC3L-202ENST00000368602 KIF21AQ7Z4S6 1674 aa15.58■□□□□ 0.08
TRAPPC3L-202ENST00000368602 TRHP20396 242 aaPredicted RBP15.58■□□□□ 0.08
TRAPPC3L-202ENST00000368602 PEG3Q9GZU2 1588 aa15.55■□□□□ 0.08
TRAPPC3L-202ENST00000368602 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
TRAPPC3L-202ENST00000368602 ZNF219Q9P2Y4 722 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC3L-202ENST00000368602 TRIM41Q8WV44 630 aa15.49■□□□□ 0.07
TRAPPC3L-202ENST00000368602 PDS5BQ9NTI5 1447 aa15.46■□□□□ 0.07
TRAPPC3L-202ENST00000368602 ABCB7O75027 752 aa15.45■□□□□ 0.06
TRAPPC3L-202ENST00000368602 WIZO95785 1651 aa15.42■□□□□ 0.06
TRAPPC3L-202ENST00000368602 ATF5Q9Y2D1 282 aaPredicted RBP15.41■□□□□ 0.06
TRAPPC3L-202ENST00000368602 CADPSQ9ULU8 1353 aa15.4■□□□□ 0.06
TRAPPC3L-202ENST00000368602 MRC2Q9UBG0 1479 aa15.39■□□□□ 0.05
TRAPPC3L-202ENST00000368602 WDR62O43379 1518 aa15.34■□□□□ 0.05
TRAPPC3L-202ENST00000368602 CEP164Q9UPV0 1460 aa15.29■□□□□ 0.04
TRAPPC3L-202ENST00000368602 FANCD2Q9BXW9 1451 aa15.27■□□□□ 0.04
TRAPPC3L-202ENST00000368602 POLA2Q14181 598 aa15.24■□□□□ 0.03
TRAPPC3L-202ENST00000368602 CSRNP3Q8WYN3 585 aa15.19■□□□□ 0.02
TRAPPC3L-202ENST00000368602 URB2Q14146 1524 aaKnown RBP15.18■□□□□ 0.02
TRAPPC3L-202ENST00000368602 CFTRP13569 1480 aa15.17■□□□□ 0.02
TRAPPC3L-202ENST00000368602 ATXN8OSP0DMR3 200 aa15.16■□□□□ 0.02
TRAPPC3L-202ENST00000368602 RSF1Q96T23 1441 aaPredicted RBP15.16■□□□□ 0.02
TRAPPC3L-202ENST00000368602 OSCARQ8IYS5 282 aa15.14■□□□□ 0.01
TRAPPC3L-202ENST00000368602 TOP2AP11388 1531 aaKnown RBP15.13■□□□□ 0.01
TRAPPC3L-202ENST00000368602 EHMT2Q96KQ7 1210 aa15.11■□□□□ 0.01
TRAPPC3L-202ENST00000368602 ZNF608Q9ULD9 1512 aaPredicted RBP15.06■□□□□ 0
TRAPPC3L-202ENST00000368602 RIMBP3CA6NJZ7 1639 aa15.03■□□□□ -0
TRAPPC3L-202ENST00000368602 RIMBP3BA6NNM3 1639 aa15.03■□□□□ -0
TRAPPC3L-202ENST00000368602 RIMBP3Q9UFD9 1639 aa15.03■□□□□ -0
TRAPPC3L-202ENST00000368602 PRDM2Q13029 1718 aa15□□□□□ -0.01
TRAPPC3L-202ENST00000368602 CCDC88BA6NC98 1476 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms