RNA–Protein interactions for RNA: ENST00000416826.6

VLDLR-AS1-201, VLDLR antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VLDLR-AS1, Length 3,167 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VLDLR-AS1-201ENST00000416826 CHIC1Q5VXU3 224 aa16.19■□□□□ 0.18
VLDLR-AS1-201ENST00000416826 NISCHQ9Y2I1 1504 aa16.11■□□□□ 0.17
VLDLR-AS1-201ENST00000416826 AEBP2Q6ZN18 517 aaPredicted RBP15.62■□□□□ 0.09
VLDLR-AS1-201ENST00000416826 PHF23Q9BUL5 403 aaPredicted RBP14.61□□□□□ -0.07
VLDLR-AS1-201ENST00000416826 EHMT2Q96KQ7 1210 aa14.48□□□□□ -0.09
VLDLR-AS1-201ENST00000416826 CCDC180Q9P1Z9 1646 aa14.24□□□□□ -0.13
VLDLR-AS1-201ENST00000416826 SLC24A1O60721 1099 aa14.19□□□□□ -0.14
VLDLR-AS1-201ENST00000416826 SHROOM4Q9ULL8 1493 aa13.98□□□□□ -0.17
VLDLR-AS1-201ENST00000416826 SUPT5HO00267 1087 aaKnown RBP13.84□□□□□ -0.19
VLDLR-AS1-201ENST00000416826 PELP1Q8IZL8 1130 aaKnown RBP13.83□□□□□ -0.19
VLDLR-AS1-201ENST00000416826 PLPPR3Q6T4P5 718 aa13.7□□□□□ -0.22
VLDLR-AS1-201ENST00000416826 ZCCHC6Q5VYS8 1495 aaKnown RBP13.66□□□□□ -0.22
VLDLR-AS1-201ENST00000416826 KCNA4P22459 653 aa13.65□□□□□ -0.22
VLDLR-AS1-201ENST00000416826 MYT1Q01538 1121 aa13.54□□□□□ -0.24
VLDLR-AS1-201ENST00000416826 MYO15BQ96JP2 1530 aa13.51□□□□□ -0.25
VLDLR-AS1-201ENST00000416826 CSRNP3Q8WYN3 585 aa13.51□□□□□ -0.25
VLDLR-AS1-201ENST00000416826 HRCP23327 699 aa13.5□□□□□ -0.25
VLDLR-AS1-201ENST00000416826 RTN4Q9NQC3 1192 aaKnown RBP13.44□□□□□ -0.26
VLDLR-AS1-201ENST00000416826 DCAF8L2P0C7V8 631 aa13.42□□□□□ -0.26
VLDLR-AS1-201ENST00000416826 PCGF6Q9BYE7 350 aa13.37□□□□□ -0.27
VLDLR-AS1-201ENST00000416826 PPARGC1BQ86YN6 1023 aaKnown RBP13.21□□□□□ -0.3
VLDLR-AS1-201ENST00000416826 LOC105371045A0A1W2PR82 267 aa13.18□□□□□ -0.3
VLDLR-AS1-201ENST00000416826 DCAF1Q9Y4B6 1507 aa13.18□□□□□ -0.3
VLDLR-AS1-201ENST00000416826 ADRA2BP18089 450 aa13.17□□□□□ -0.3
VLDLR-AS1-201ENST00000416826 SLC4A1APQ9BWU0 796 aaKnown RBP13.07□□□□□ -0.32
VLDLR-AS1-201ENST00000416826 NACADO15069 1562 aa13.06□□□□□ -0.32
VLDLR-AS1-201ENST00000416826 TRIM26Q12899 539 aaPredicted RBP13.05□□□□□ -0.32
VLDLR-AS1-201ENST00000416826 AMER1Q5JTC6 1135 aaPredicted RBP13.02□□□□□ -0.32
VLDLR-AS1-201ENST00000416826 TTBK1Q5TCY1 1321 aaPredicted RBP12.98□□□□□ -0.33
VLDLR-AS1-201ENST00000416826 RB1CC1Q8TDY2 1594 aa12.92□□□□□ -0.34
VLDLR-AS1-201ENST00000416826 ABCC9O60706 1549 aa12.9□□□□□ -0.35
VLDLR-AS1-201ENST00000416826 RSF1Q96T23 1441 aaPredicted RBP12.87□□□□□ -0.35
VLDLR-AS1-201ENST00000416826 SCAF1Q9H7N4 1312 aaKnown RBP12.86□□□□□ -0.35
VLDLR-AS1-201ENST00000416826 TRIM41Q8WV44 630 aa12.86□□□□□ -0.35
VLDLR-AS1-201ENST00000416826 ZEB1P37275 1124 aaPredicted RBP12.85□□□□□ -0.35
VLDLR-AS1-201ENST00000416826 PRKCSHP14314 528 aaPredicted RBP12.82□□□□□ -0.36
VLDLR-AS1-201ENST00000416826 FAM9AQ8IZU1 332 aaPredicted RBP12.79□□□□□ -0.36
VLDLR-AS1-201ENST00000416826 SCRIBQ14160 1630 aa12.76□□□□□ -0.37
VLDLR-AS1-201ENST00000416826 UNC13AQ9UPW8 1703 aa12.75□□□□□ -0.37
VLDLR-AS1-201ENST00000416826 SENP3Q9H4L4 574 aaPredicted RBP12.7□□□□□ -0.38
VLDLR-AS1-201ENST00000416826 ZBTB22O15209 634 aa12.65□□□□□ -0.38
VLDLR-AS1-201ENST00000416826 NCBP3Q53F19 620 aaKnown RBP12.61□□□□□ -0.39
VLDLR-AS1-201ENST00000416826 BCL11AQ9H165 835 aa12.61□□□□□ -0.39
VLDLR-AS1-201ENST00000416826 PPP6R1Q9UPN7 881 aa12.6□□□□□ -0.39
VLDLR-AS1-201ENST00000416826 CECR2Q9BXF3 1484 aa12.59□□□□□ -0.39
VLDLR-AS1-201ENST00000416826 MROH2BQ7Z745 1585 aa12.55□□□□□ -0.4
VLDLR-AS1-201ENST00000416826 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.49□□□□□ -0.41
VLDLR-AS1-201ENST00000416826 BICRAQ9NZM4 1560 aa12.49□□□□□ -0.41
VLDLR-AS1-201ENST00000416826 CCER1Q8TC90 406 aaPredicted RBP12.47□□□□□ -0.41
VLDLR-AS1-201ENST00000416826 WIZO95785 1651 aa12.47□□□□□ -0.41
VLDLR-AS1-201ENST00000416826 APLP2Q06481 763 aa12.44□□□□□ -0.42
VLDLR-AS1-201ENST00000416826 ERICH6Q7L0X2 663 aa12.42□□□□□ -0.42
VLDLR-AS1-201ENST00000416826 ACIN1Q9UKV3 1341 aaKnown RBP12.4□□□□□ -0.42
VLDLR-AS1-201ENST00000416826 BAZ1AQ9NRL2 1556 aaPredicted RBP12.38□□□□□ -0.43
VLDLR-AS1-201ENST00000416826 NEUROD1Q13562 356 aa12.36□□□□□ -0.43
VLDLR-AS1-201ENST00000416826 EIF4G1Q04637 1599 aaKnown RBP12.36□□□□□ -0.43
VLDLR-AS1-201ENST00000416826 DIEXFQ68CQ4 756 aaKnown RBP12.35□□□□□ -0.43
VLDLR-AS1-201ENST00000416826 WRNQ14191 1432 aaPredicted RBP eCLIP12.33□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 CCDC88BA6NC98 1476 aa12.32□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 PPP4R3CPQ6ZMV5 832 aa12.31□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 NPM3O75607 178 aaKnown RBP12.3□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 CEP162Q5TB80 1403 aa12.29□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 ABCC8Q09428 1581 aa12.29□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 CENPBP07199 599 aaPredicted RBP12.28□□□□□ -0.44
VLDLR-AS1-201ENST00000416826 TNIKQ9UKE5 1360 aa12.27□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 TOP2AP11388 1531 aaKnown RBP12.26□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 GTF3C3Q9Y5Q9 886 aa12.26□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 SOGA1O94964 1423 aa12.26□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 DAXXQ9UER7 740 aaPredicted RBP12.22□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 SMARCA2P51531 1590 aa12.21□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 PEG3Q9GZU2 1588 aa12.21□□□□□ -0.45
VLDLR-AS1-201ENST00000416826 ZNF316A6NFI3 1004 aaPredicted RBP12.2□□□□□ -0.46
VLDLR-AS1-201ENST00000416826 EEA1Q15075 1411 aa12.2□□□□□ -0.46
VLDLR-AS1-201ENST00000416826 SMARCA4P51532 1647 aa12.19□□□□□ -0.46
VLDLR-AS1-201ENST00000416826 RUSC2Q8N2Y8 1516 aa12.18□□□□□ -0.46
VLDLR-AS1-201ENST00000416826 TAOK2Q9UL54 1235 aa12.18□□□□□ -0.46
VLDLR-AS1-201ENST00000416826 FKBP8Q14318 412 aa12.17□□□□□ -0.46
VLDLR-AS1-201ENST00000416826 GOLGA3Q08378 1498 aa12.13□□□□□ -0.47
VLDLR-AS1-201ENST00000416826 HNRNPUL2Q1KMD3 747 aaKnown RBP12.09□□□□□ -0.47
VLDLR-AS1-201ENST00000416826 PLCB2Q00722 1185 aa12.08□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 YTHDC1Q96MU7 727 aaKnown RBP12.08□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 TIMELESSQ9UNS1 1208 aa12.08□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 TPRNQ4KMQ1 711 aa12.06□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 MIER1Q8N108 512 aa12.06□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 HAP1P54257 671 aaPredicted RBP12.05□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 BCANQ96GW7 911 aa12.05□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 HMGXB3Q12766 1538 aa12.04□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 CEP164Q9UPV0 1460 aa12.04□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 ANP32EQ9BTT0 268 aa12.03□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 CLIP1P30622 1438 aa12.02□□□□□ -0.48
VLDLR-AS1-201ENST00000416826 PABPN1Q86U42 306 aaKnown RBP eCLIP12.01□□□□□ -0.49
VLDLR-AS1-201ENST00000416826 VPS8Q8N3P4 1428 aa11.99□□□□□ -0.49
VLDLR-AS1-201ENST00000416826 KIF21BO75037 1637 aa11.98□□□□□ -0.49
VLDLR-AS1-201ENST00000416826 SYNJ1O43426 1573 aa11.97□□□□□ -0.49
VLDLR-AS1-201ENST00000416826 TULP1O00294 542 aaPredicted RBP11.96□□□□□ -0.49
VLDLR-AS1-201ENST00000416826 FOXD4L1Q9NU39 408 aa11.95□□□□□ -0.5
VLDLR-AS1-201ENST00000416826 RANGAP1P46060 587 aaPredicted RBP11.94□□□□□ -0.5
VLDLR-AS1-201ENST00000416826 RAPGEF2Q9Y4G8 1499 aa11.94□□□□□ -0.5
VLDLR-AS1-201ENST00000416826 BAZ1BQ9UIG0 1483 aaKnown RBP11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms