RNA–Protein interactions for RNA: ENST00000400419.1

SMIM2-201, Transcript of small integral membrane protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM2, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM2-201ENST00000400419 NISCHQ9Y2I1 1504 aa16.73■□□□□ 0.27
SMIM2-201ENST00000400419 AEBP2Q6ZN18 517 aaPredicted RBP14.47□□□□□ -0.09
SMIM2-201ENST00000400419 CCDC180Q9P1Z9 1646 aa14.33□□□□□ -0.12
SMIM2-201ENST00000400419 ZCCHC6Q5VYS8 1495 aaKnown RBP14.19□□□□□ -0.14
SMIM2-201ENST00000400419 SHROOM4Q9ULL8 1493 aa13.94□□□□□ -0.18
SMIM2-201ENST00000400419 CHIC1Q5VXU3 224 aa13.92□□□□□ -0.18
SMIM2-201ENST00000400419 DCAF1Q9Y4B6 1507 aa13.9□□□□□ -0.18
SMIM2-201ENST00000400419 SUPT5HO00267 1087 aaKnown RBP13.68□□□□□ -0.22
SMIM2-201ENST00000400419 MYO15BQ96JP2 1530 aa13.55□□□□□ -0.24
SMIM2-201ENST00000400419 DCAF8L2P0C7V8 631 aa13.51□□□□□ -0.25
SMIM2-201ENST00000400419 ABCC9O60706 1549 aa13.4□□□□□ -0.26
SMIM2-201ENST00000400419 NACADO15069 1562 aa13.24□□□□□ -0.29
SMIM2-201ENST00000400419 SCRIBQ14160 1630 aa13.21□□□□□ -0.3
SMIM2-201ENST00000400419 RSF1Q96T23 1441 aaPredicted RBP13.19□□□□□ -0.3
SMIM2-201ENST00000400419 RB1CC1Q8TDY2 1594 aa13.11□□□□□ -0.31
SMIM2-201ENST00000400419 HRCP23327 699 aa13.05□□□□□ -0.32
SMIM2-201ENST00000400419 MROH2BQ7Z745 1585 aa12.91□□□□□ -0.34
SMIM2-201ENST00000400419 CECR2Q9BXF3 1484 aa12.91□□□□□ -0.34
SMIM2-201ENST00000400419 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
SMIM2-201ENST00000400419 BAZ1AQ9NRL2 1556 aaPredicted RBP12.89□□□□□ -0.35
SMIM2-201ENST00000400419 LOC105371045A0A1W2PR82 267 aa12.87□□□□□ -0.35
SMIM2-201ENST00000400419 TRIM41Q8WV44 630 aa12.87□□□□□ -0.35
SMIM2-201ENST00000400419 TRIM26Q12899 539 aaPredicted RBP12.83□□□□□ -0.36
SMIM2-201ENST00000400419 WIZO95785 1651 aa12.79□□□□□ -0.36
SMIM2-201ENST00000400419 EIF4G1Q04637 1599 aaKnown RBP12.78□□□□□ -0.36
SMIM2-201ENST00000400419 TOP2AP11388 1531 aaKnown RBP12.77□□□□□ -0.37
SMIM2-201ENST00000400419 SMARCA4P51532 1647 aa12.73□□□□□ -0.37
SMIM2-201ENST00000400419 ZEB1P37275 1124 aaPredicted RBP12.67□□□□□ -0.38
SMIM2-201ENST00000400419 SMARCA2P51531 1590 aa12.63□□□□□ -0.39
SMIM2-201ENST00000400419 CCDC88BA6NC98 1476 aa12.61□□□□□ -0.39
SMIM2-201ENST00000400419 EEA1Q15075 1411 aa12.6□□□□□ -0.39
SMIM2-201ENST00000400419 PEG3Q9GZU2 1588 aa12.6□□□□□ -0.39
SMIM2-201ENST00000400419 UNC13AQ9UPW8 1703 aa12.59□□□□□ -0.39
SMIM2-201ENST00000400419 FAM9AQ8IZU1 332 aaPredicted RBP12.58□□□□□ -0.4
SMIM2-201ENST00000400419 BICRAQ9NZM4 1560 aa12.54□□□□□ -0.4
SMIM2-201ENST00000400419 PPARGC1BQ86YN6 1023 aaKnown RBP12.53□□□□□ -0.4
SMIM2-201ENST00000400419 WRNQ14191 1432 aaPredicted RBP eCLIP12.52□□□□□ -0.41
SMIM2-201ENST00000400419 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
SMIM2-201ENST00000400419 TNIKQ9UKE5 1360 aa12.46□□□□□ -0.41
SMIM2-201ENST00000400419 DNAJC5BQ9UF47 199 aa12.43□□□□□ -0.42
SMIM2-201ENST00000400419 CEP162Q5TB80 1403 aa12.41□□□□□ -0.42
SMIM2-201ENST00000400419 ATAD2BQ9ULI0 1458 aa12.4□□□□□ -0.42
SMIM2-201ENST00000400419 GOLGA3Q08378 1498 aa12.4□□□□□ -0.43
SMIM2-201ENST00000400419 SOGA1O94964 1423 aa12.38□□□□□ -0.43
SMIM2-201ENST00000400419 CSRNP3Q8WYN3 585 aa12.37□□□□□ -0.43
SMIM2-201ENST00000400419 BAZ1BQ9UIG0 1483 aaKnown RBP12.37□□□□□ -0.43
SMIM2-201ENST00000400419 PABPN1Q86U42 306 aaKnown RBP eCLIP12.35□□□□□ -0.43
SMIM2-201ENST00000400419 CEP164Q9UPV0 1460 aa12.34□□□□□ -0.43
SMIM2-201ENST00000400419 KIF21BO75037 1637 aa12.33□□□□□ -0.43
SMIM2-201ENST00000400419 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
SMIM2-201ENST00000400419 SYNJ1O43426 1573 aa12.29□□□□□ -0.44
SMIM2-201ENST00000400419 PHF23Q9BUL5 403 aaPredicted RBP12.28□□□□□ -0.44
SMIM2-201ENST00000400419 HMGXB3Q12766 1538 aa12.27□□□□□ -0.44
SMIM2-201ENST00000400419 RUSC2Q8N2Y8 1516 aa12.27□□□□□ -0.45
SMIM2-201ENST00000400419 TOP2BQ02880 1626 aa12.22□□□□□ -0.45
SMIM2-201ENST00000400419 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
SMIM2-201ENST00000400419 UBTFP17480 764 aaKnown RBP12.22□□□□□ -0.45
SMIM2-201ENST00000400419 SENP3Q9H4L4 574 aaPredicted RBP12.21□□□□□ -0.45
SMIM2-201ENST00000400419 BIVM-ERCC5R4GMW8 1640 aa12.2□□□□□ -0.46
SMIM2-201ENST00000400419 CLIP1P30622 1438 aa12.2□□□□□ -0.46
SMIM2-201ENST00000400419 CCER1Q8TC90 406 aaPredicted RBP12.19□□□□□ -0.46
SMIM2-201ENST00000400419 VPS8Q8N3P4 1428 aa12.19□□□□□ -0.46
SMIM2-201ENST00000400419 ERICH3Q5RHP9 1530 aa12.17□□□□□ -0.46
SMIM2-201ENST00000400419 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.13□□□□□ -0.47
SMIM2-201ENST00000400419 PRXQ9BXM0 1461 aa12.12□□□□□ -0.47
SMIM2-201ENST00000400419 RAPGEF2Q9Y4G8 1499 aa12.12□□□□□ -0.47
SMIM2-201ENST00000400419 CFTRP13569 1480 aa12.09□□□□□ -0.47
SMIM2-201ENST00000400419 KIF27Q86VH2 1401 aa12.06□□□□□ -0.48
SMIM2-201ENST00000400419 CUX1P39880 1505 aa12.06□□□□□ -0.48
SMIM2-201ENST00000400419 APLP2Q06481 763 aa12.04□□□□□ -0.48
SMIM2-201ENST00000400419 ARAP1Q96P48 1450 aa12.01□□□□□ -0.49
SMIM2-201ENST00000400419 PRDM2Q13029 1718 aa11.98□□□□□ -0.49
SMIM2-201ENST00000400419 TTBK1Q5TCY1 1321 aaPredicted RBP11.98□□□□□ -0.49
SMIM2-201ENST00000400419 CLSPNQ9HAW4 1339 aa11.98□□□□□ -0.49
SMIM2-201ENST00000400419 DIEXFQ68CQ4 756 aaKnown RBP11.96□□□□□ -0.49
SMIM2-201ENST00000400419 ZNF316A6NFI3 1004 aaPredicted RBP11.94□□□□□ -0.5
SMIM2-201ENST00000400419 CADPSQ9ULU8 1353 aa11.93□□□□□ -0.5
SMIM2-201ENST00000400419 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
SMIM2-201ENST00000400419 RRBP1Q9P2E9 1410 aaKnown RBP11.93□□□□□ -0.5
SMIM2-201ENST00000400419 CENPBP07199 599 aaPredicted RBP11.92□□□□□ -0.5
SMIM2-201ENST00000400419 MAP3K1Q13233 1512 aa11.91□□□□□ -0.5
SMIM2-201ENST00000400419 CUX2O14529 1486 aa11.9□□□□□ -0.5
SMIM2-201ENST00000400419 SCAF1Q9H7N4 1312 aaKnown RBP11.89□□□□□ -0.51
SMIM2-201ENST00000400419 ACIN1Q9UKV3 1341 aaKnown RBP11.89□□□□□ -0.51
SMIM2-201ENST00000400419 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
SMIM2-201ENST00000400419 ARHGAP35Q9NRY4 1499 aa11.89□□□□□ -0.51
SMIM2-201ENST00000400419 IGF1RP08069 1367 aa11.87□□□□□ -0.51
SMIM2-201ENST00000400419 FGD5Q6ZNL6 1462 aa11.84□□□□□ -0.51
SMIM2-201ENST00000400419 CARMIL1Q5VZK9 1371 aa11.83□□□□□ -0.52
SMIM2-201ENST00000400419 DHX57Q6P158 1386 aaKnown RBP11.82□□□□□ -0.52
SMIM2-201ENST00000400419 CCNB3Q8WWL7 1395 aa11.81□□□□□ -0.52
SMIM2-201ENST00000400419 FHAD1B1AJZ9 1412 aa11.81□□□□□ -0.52
SMIM2-201ENST00000400419 DNMBPQ6XZF7 1577 aa11.8□□□□□ -0.52
SMIM2-201ENST00000400419 FANCD2Q9BXW9 1451 aa11.8□□□□□ -0.52
SMIM2-201ENST00000400419 KANK4Q5T7N3 995 aaPredicted RBP11.79□□□□□ -0.52
SMIM2-201ENST00000400419 ABCA10Q8WWZ4 1543 aa11.79□□□□□ -0.52
SMIM2-201ENST00000400419 TIAM1Q13009 1591 aa11.79□□□□□ -0.52
SMIM2-201ENST00000400419 CC2D2AQ9P2K1 1620 aa11.78□□□□□ -0.52
SMIM2-201ENST00000400419 NEUROD1Q13562 356 aa11.78□□□□□ -0.52
SMIM2-201ENST00000400419 EFCAB5A4FU69 1503 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms