RNA–Protein interactions for RNA: ENST00000583236.1

AC004253.1-201, humanhuman

TSL 5 BASIC

Gene AC004253.1, Length 488 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004253.1-201ENST00000583236 AEBP2Q6ZN18 517 aaPredicted RBP27.48■■□□□ 1.99
AC004253.1-201ENST00000583236 CHIC1Q5VXU3 224 aa26.1■■□□□ 1.77
AC004253.1-201ENST00000583236 SENP3Q9H4L4 574 aaPredicted RBP23.54■■□□□ 1.36
AC004253.1-201ENST00000583236 PHF23Q9BUL5 403 aaPredicted RBP23.21■■□□□ 1.31
AC004253.1-201ENST00000583236 NISCHQ9Y2I1 1504 aa22.86■■□□□ 1.25
AC004253.1-201ENST00000583236 FOXD1Q16676 465 aa21.89■■□□□ 1.09
AC004253.1-201ENST00000583236 PLPPR3Q6T4P5 718 aa20.89■□□□□ 0.93
AC004253.1-201ENST00000583236 ABCC9O60706 1549 aa20.61■□□□□ 0.89
AC004253.1-201ENST00000583236 CCDC180Q9P1Z9 1646 aa20.59■□□□□ 0.89
AC004253.1-201ENST00000583236 MSH5O43196 834 aa20.58■□□□□ 0.89
AC004253.1-201ENST00000583236 PIAS4Q8N2W9 510 aaPredicted RBP20.5■□□□□ 0.87
AC004253.1-201ENST00000583236 PPP6R1Q9UPN7 881 aa20.41■□□□□ 0.86
AC004253.1-201ENST00000583236 ADRA2BP18089 450 aa20.38■□□□□ 0.85
AC004253.1-201ENST00000583236 POTEDQ86YR6 584 aa20.1■□□□□ 0.81
AC004253.1-201ENST00000583236 RB1CC1Q8TDY2 1594 aa19.56■□□□□ 0.72
AC004253.1-201ENST00000583236 DNAJC5BQ9UF47 199 aa19.41■□□□□ 0.7
AC004253.1-201ENST00000583236 NACADO15069 1562 aa19.4■□□□□ 0.7
AC004253.1-201ENST00000583236 UNC13AQ9UPW8 1703 aa19.28■□□□□ 0.68
AC004253.1-201ENST00000583236 MYO15BQ96JP2 1530 aa19.13■□□□□ 0.65
AC004253.1-201ENST00000583236 BICRAQ9NZM4 1560 aa19.12■□□□□ 0.65
AC004253.1-201ENST00000583236 PABPN1Q86U42 306 aaKnown RBP eCLIP19.1■□□□□ 0.65
AC004253.1-201ENST00000583236 DCAF8L2P0C7V8 631 aa19.09■□□□□ 0.65
AC004253.1-201ENST00000583236 ZCCHC6Q5VYS8 1495 aaKnown RBP18.97■□□□□ 0.63
AC004253.1-201ENST00000583236 DCAF1Q9Y4B6 1507 aa18.87■□□□□ 0.61
AC004253.1-201ENST00000583236 SCRIBQ14160 1630 aa18.75■□□□□ 0.59
AC004253.1-201ENST00000583236 SCAF1Q9H7N4 1312 aaKnown RBP18.74■□□□□ 0.59
AC004253.1-201ENST00000583236 SHROOM4Q9ULL8 1493 aa18.73■□□□□ 0.59
AC004253.1-201ENST00000583236 MAPK8IP2Q13387 824 aaPredicted RBP18.72■□□□□ 0.59
AC004253.1-201ENST00000583236 CC2D2AQ9P2K1 1620 aa18.65■□□□□ 0.58
AC004253.1-201ENST00000583236 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
AC004253.1-201ENST00000583236 EIF4G1Q04637 1599 aaKnown RBP18.59■□□□□ 0.57
AC004253.1-201ENST00000583236 CECR2Q9BXF3 1484 aa18.54■□□□□ 0.56
AC004253.1-201ENST00000583236 PPP4R3CPQ6ZMV5 832 aa18.28■□□□□ 0.52
AC004253.1-201ENST00000583236 CNKSR2Q8WXI2 1034 aa17.97■□□□□ 0.47
AC004253.1-201ENST00000583236 DCAF8L1A6NGE4 600 aa17.95■□□□□ 0.46
AC004253.1-201ENST00000583236 HOXD11P31277 338 aaPredicted RBP17.92■□□□□ 0.46
AC004253.1-201ENST00000583236 NCAPD3P42695 1498 aa17.91■□□□□ 0.46
AC004253.1-201ENST00000583236 SMARCA4P51532 1647 aa17.89■□□□□ 0.45
AC004253.1-201ENST00000583236 ATAD2BQ9ULI0 1458 aa17.88■□□□□ 0.45
AC004253.1-201ENST00000583236 HMGXB3Q12766 1538 aa17.82■□□□□ 0.44
AC004253.1-201ENST00000583236 RNF216Q9NWF9 866 aaPredicted RBP17.8■□□□□ 0.44
AC004253.1-201ENST00000583236 SMARCA2P51531 1590 aa17.79■□□□□ 0.44
AC004253.1-201ENST00000583236 DNAJC5Q9H3Z4 198 aa17.76■□□□□ 0.43
AC004253.1-201ENST00000583236 CUX2O14529 1486 aa17.75■□□□□ 0.43
AC004253.1-201ENST00000583236 NESP48681 1621 aa17.73■□□□□ 0.43
AC004253.1-201ENST00000583236 BAZ1AQ9NRL2 1556 aaPredicted RBP17.72■□□□□ 0.43
AC004253.1-201ENST00000583236 PEG3Q9GZU2 1588 aa17.71■□□□□ 0.43
AC004253.1-201ENST00000583236 ERCC6Q03468 1493 aa17.71■□□□□ 0.43
AC004253.1-201ENST00000583236 CACNB1Q02641 598 aaPredicted RBP17.7■□□□□ 0.42
AC004253.1-201ENST00000583236 BAZ1BQ9UIG0 1483 aaKnown RBP17.66■□□□□ 0.42
AC004253.1-201ENST00000583236 MROH2BQ7Z745 1585 aa17.66■□□□□ 0.42
AC004253.1-201ENST00000583236 NCBP3Q53F19 620 aaKnown RBP17.63■□□□□ 0.41
AC004253.1-201ENST00000583236 THOC2Q8NI27 1593 aaKnown RBP17.62■□□□□ 0.41
AC004253.1-201ENST00000583236 KIF21AQ7Z4S6 1674 aa17.54■□□□□ 0.4
AC004253.1-201ENST00000583236 LAMC3Q9Y6N6 1575 aa17.53■□□□□ 0.4
AC004253.1-201ENST00000583236 RNF39Q9H2S5 420 aa17.5■□□□□ 0.39
AC004253.1-201ENST00000583236 WIZO95785 1651 aa17.45■□□□□ 0.38
AC004253.1-201ENST00000583236 PDS5BQ9NTI5 1447 aa17.34■□□□□ 0.37
AC004253.1-201ENST00000583236 CADPSQ9ULU8 1353 aa17.32■□□□□ 0.36
AC004253.1-201ENST00000583236 WDR62O43379 1518 aa17.31■□□□□ 0.36
AC004253.1-201ENST00000583236 NPM3O75607 178 aaKnown RBP17.29■□□□□ 0.36
AC004253.1-201ENST00000583236 C1QBPQ07021 282 aaKnown RBP17.29■□□□□ 0.36
AC004253.1-201ENST00000583236 MRC2Q9UBG0 1479 aa17.29■□□□□ 0.36
AC004253.1-201ENST00000583236 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.34
AC004253.1-201ENST00000583236 TOP2AP11388 1531 aaKnown RBP17.19■□□□□ 0.34
AC004253.1-201ENST00000583236 CEP164Q9UPV0 1460 aa17.18■□□□□ 0.34
AC004253.1-201ENST00000583236 CFTRP13569 1480 aa17.17■□□□□ 0.34
AC004253.1-201ENST00000583236 FANCD2Q9BXW9 1451 aa17.17■□□□□ 0.34
AC004253.1-201ENST00000583236 GRWD1Q9BQ67 446 aaKnown RBP eCLIP17.15■□□□□ 0.34
AC004253.1-201ENST00000583236 URB2Q14146 1524 aaKnown RBP17.11■□□□□ 0.33
AC004253.1-201ENST00000583236 PRDM2Q13029 1718 aa17.07■□□□□ 0.32
AC004253.1-201ENST00000583236 CCDC88BA6NC98 1476 aa16.97■□□□□ 0.31
AC004253.1-201ENST00000583236 TRIM41Q8WV44 630 aa16.93■□□□□ 0.3
AC004253.1-201ENST00000583236 KCNA4P22459 653 aa16.9■□□□□ 0.3
AC004253.1-201ENST00000583236 ZNF608Q9ULD9 1512 aaPredicted RBP16.9■□□□□ 0.3
AC004253.1-201ENST00000583236 TOPBP1Q92547 1522 aa16.87■□□□□ 0.29
AC004253.1-201ENST00000583236 EIF4G3O43432 1585 aaKnown RBP16.83■□□□□ 0.28
AC004253.1-201ENST00000583236 IFT140Q96RY7 1462 aa16.83■□□□□ 0.28
AC004253.1-201ENST00000583236 DNMBPQ6XZF7 1577 aa16.81■□□□□ 0.28
AC004253.1-201ENST00000583236 RIMBP3CA6NJZ7 1639 aa16.8■□□□□ 0.28
AC004253.1-201ENST00000583236 RIMBP3BA6NNM3 1639 aa16.8■□□□□ 0.28
AC004253.1-201ENST00000583236 RIMBP3Q9UFD9 1639 aa16.8■□□□□ 0.28
AC004253.1-201ENST00000583236 OSCARQ8IYS5 282 aa16.79■□□□□ 0.28
AC004253.1-201ENST00000583236 TARBP1Q13395 1621 aaKnown RBP16.78■□□□□ 0.28
AC004253.1-201ENST00000583236 CHD1O14646 1710 aa16.72■□□□□ 0.27
AC004253.1-201ENST00000583236 ARHGEF11O15085 1522 aa16.71■□□□□ 0.27
AC004253.1-201ENST00000583236 U3KPZ7 1027 aaPredicted RBP16.71■□□□□ 0.27
AC004253.1-201ENST00000583236 ABCC8Q09428 1581 aa16.71■□□□□ 0.27
AC004253.1-201ENST00000583236 POLA1P09884 1462 aaPredicted RBP16.7■□□□□ 0.26
AC004253.1-201ENST00000583236 AQRO60306 1485 aaKnown RBP eCLIP16.67■□□□□ 0.26
AC004253.1-201ENST00000583236 RAD54L2Q9Y4B4 1467 aa16.63■□□□□ 0.25
AC004253.1-201ENST00000583236 CUX1P39880 1505 aa16.59■□□□□ 0.25
AC004253.1-201ENST00000583236 FGD5Q6ZNL6 1462 aa16.58■□□□□ 0.24
AC004253.1-201ENST00000583236 WDR97A6NE52 1622 aa16.58■□□□□ 0.24
AC004253.1-201ENST00000583236 ARAP1Q96P48 1450 aa16.57■□□□□ 0.24
AC004253.1-201ENST00000583236 SNAPC4Q5SXM2 1469 aa16.54■□□□□ 0.24
AC004253.1-201ENST00000583236 TDRD9Q8NDG6 1382 aaKnown RBP16.53■□□□□ 0.24
AC004253.1-201ENST00000583236 CAPN15O75808 1086 aa16.53■□□□□ 0.24
AC004253.1-201ENST00000583236 CLASP1Q7Z460 1538 aa16.53■□□□□ 0.24
AC004253.1-201ENST00000583236 SOGA1O94964 1423 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms