RNA–Protein interactions for RNA: ENST00000495634.5

ABCA9-207, Transcript of ATP binding cassette subfamily A member 9, humanhuman

TSL 1 (best) BASIC

Gene ABCA9, Length 1,428 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA9-207ENST00000495634 AEBP2Q6ZN18 517 aaPredicted RBP23.47■■□□□ 1.35
ABCA9-207ENST00000495634 CHIC1Q5VXU3 224 aa22.99■■□□□ 1.27
ABCA9-207ENST00000495634 NISCHQ9Y2I1 1504 aa20.71■□□□□ 0.91
ABCA9-207ENST00000495634 PHF23Q9BUL5 403 aaPredicted RBP20.16■□□□□ 0.82
ABCA9-207ENST00000495634 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.79
ABCA9-207ENST00000495634 PLPPR3Q6T4P5 718 aa18.7■□□□□ 0.58
ABCA9-207ENST00000495634 FOXD1Q16676 465 aa18.49■□□□□ 0.55
ABCA9-207ENST00000495634 CCDC180Q9P1Z9 1646 aa18.44■□□□□ 0.54
ABCA9-207ENST00000495634 ABCC9O60706 1549 aa17.92■□□□□ 0.46
ABCA9-207ENST00000495634 ADRA2BP18089 450 aa17.78■□□□□ 0.44
ABCA9-207ENST00000495634 PPP6R1Q9UPN7 881 aa17.77■□□□□ 0.44
ABCA9-207ENST00000495634 PIAS4Q8N2W9 510 aaPredicted RBP17.49■□□□□ 0.39
ABCA9-207ENST00000495634 NACADO15069 1562 aa17.31■□□□□ 0.36
ABCA9-207ENST00000495634 RB1CC1Q8TDY2 1594 aa17.3■□□□□ 0.36
ABCA9-207ENST00000495634 MYO15BQ96JP2 1530 aa17.27■□□□□ 0.35
ABCA9-207ENST00000495634 ZCCHC6Q5VYS8 1495 aaKnown RBP17.25■□□□□ 0.35
ABCA9-207ENST00000495634 DCAF1Q9Y4B6 1507 aa17.18■□□□□ 0.34
ABCA9-207ENST00000495634 MSH5O43196 834 aa17.13■□□□□ 0.33
ABCA9-207ENST00000495634 DCAF8L2P0C7V8 631 aa17.12■□□□□ 0.33
ABCA9-207ENST00000495634 UNC13AQ9UPW8 1703 aa16.98■□□□□ 0.31
ABCA9-207ENST00000495634 BICRAQ9NZM4 1560 aa16.83■□□□□ 0.28
ABCA9-207ENST00000495634 SCRIBQ14160 1630 aa16.74■□□□□ 0.27
ABCA9-207ENST00000495634 PABPN1Q86U42 306 aaKnown RBP eCLIP16.71■□□□□ 0.27
ABCA9-207ENST00000495634 SHROOM4Q9ULL8 1493 aa16.65■□□□□ 0.26
ABCA9-207ENST00000495634 DNAJC5BQ9UF47 199 aa16.48■□□□□ 0.23
ABCA9-207ENST00000495634 PPP4R3CPQ6ZMV5 832 aa16.45■□□□□ 0.22
ABCA9-207ENST00000495634 SCAF1Q9H7N4 1312 aaKnown RBP16.36■□□□□ 0.21
ABCA9-207ENST00000495634 EIF4G1Q04637 1599 aaKnown RBP16.34■□□□□ 0.21
ABCA9-207ENST00000495634 CC2D2AQ9P2K1 1620 aa16.27■□□□□ 0.19
ABCA9-207ENST00000495634 CECR2Q9BXF3 1484 aa16.13■□□□□ 0.17
ABCA9-207ENST00000495634 MAPK8IP2Q13387 824 aaPredicted RBP16.11■□□□□ 0.17
ABCA9-207ENST00000495634 NCBP3Q53F19 620 aaKnown RBP16.08■□□□□ 0.16
ABCA9-207ENST00000495634 SMARCA4P51532 1647 aa16.06■□□□□ 0.16
ABCA9-207ENST00000495634 KCNA4P22459 653 aa16.05■□□□□ 0.16
ABCA9-207ENST00000495634 BAZ1AQ9NRL2 1556 aaPredicted RBP16.04■□□□□ 0.16
ABCA9-207ENST00000495634 CNKSR2Q8WXI2 1034 aa16.01■□□□□ 0.15
ABCA9-207ENST00000495634 NCAPD3P42695 1498 aa15.98■□□□□ 0.15
ABCA9-207ENST00000495634 PEG3Q9GZU2 1588 aa15.96■□□□□ 0.15
ABCA9-207ENST00000495634 ATAD2BQ9ULI0 1458 aa15.96■□□□□ 0.15
ABCA9-207ENST00000495634 DMRT2Q9Y5R5 561 aa15.94■□□□□ 0.14
ABCA9-207ENST00000495634 SMARCA2P51531 1590 aa15.94■□□□□ 0.14
ABCA9-207ENST00000495634 MROH2BQ7Z745 1585 aa15.94■□□□□ 0.14
ABCA9-207ENST00000495634 HMGXB3Q12766 1538 aa15.9■□□□□ 0.14
ABCA9-207ENST00000495634 BAZ1BQ9UIG0 1483 aaKnown RBP15.8■□□□□ 0.12
ABCA9-207ENST00000495634 NPM3O75607 178 aaKnown RBP15.77■□□□□ 0.12
ABCA9-207ENST00000495634 WIZO95785 1651 aa15.77■□□□□ 0.11
ABCA9-207ENST00000495634 RSF1Q96T23 1441 aaPredicted RBP15.76■□□□□ 0.11
ABCA9-207ENST00000495634 RNF216Q9NWF9 866 aaPredicted RBP15.69■□□□□ 0.1
ABCA9-207ENST00000495634 HOXD11P31277 338 aaPredicted RBP15.61■□□□□ 0.09
ABCA9-207ENST00000495634 TOP2AP11388 1531 aaKnown RBP15.6■□□□□ 0.09
ABCA9-207ENST00000495634 LAMC3Q9Y6N6 1575 aa15.54■□□□□ 0.08
ABCA9-207ENST00000495634 NESP48681 1621 aa15.54■□□□□ 0.08
ABCA9-207ENST00000495634 POTEDQ86YR6 584 aa15.52■□□□□ 0.08
ABCA9-207ENST00000495634 CADPSQ9ULU8 1353 aa15.47■□□□□ 0.07
ABCA9-207ENST00000495634 ERCC6Q03468 1493 aa15.42■□□□□ 0.06
ABCA9-207ENST00000495634 CFTRP13569 1480 aa15.41■□□□□ 0.06
ABCA9-207ENST00000495634 CCDC88BA6NC98 1476 aa15.41■□□□□ 0.06
ABCA9-207ENST00000495634 PDS5BQ9NTI5 1447 aa15.39■□□□□ 0.05
ABCA9-207ENST00000495634 KIF21AQ7Z4S6 1674 aa15.39■□□□□ 0.05
ABCA9-207ENST00000495634 THOC2Q8NI27 1593 aaKnown RBP15.35■□□□□ 0.05
ABCA9-207ENST00000495634 PRDM2Q13029 1718 aa15.34■□□□□ 0.05
ABCA9-207ENST00000495634 CUX2O14529 1486 aa15.33■□□□□ 0.04
ABCA9-207ENST00000495634 SLC4A1APQ9BWU0 796 aaKnown RBP15.33■□□□□ 0.04
ABCA9-207ENST00000495634 FANCD2Q9BXW9 1451 aa15.28■□□□□ 0.04
ABCA9-207ENST00000495634 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
ABCA9-207ENST00000495634 CEP164Q9UPV0 1460 aa15.25■□□□□ 0.03
ABCA9-207ENST00000495634 SUPT5HO00267 1087 aaKnown RBP15.25■□□□□ 0.03
ABCA9-207ENST00000495634 MRC2Q9UBG0 1479 aa15.24■□□□□ 0.03
ABCA9-207ENST00000495634 WDR62O43379 1518 aa15.23■□□□□ 0.03
ABCA9-207ENST00000495634 URB2Q14146 1524 aaKnown RBP15.15■□□□□ 0.02
ABCA9-207ENST00000495634 ABCC8Q09428 1581 aa15.07■□□□□ 0
ABCA9-207ENST00000495634 TOPBP1Q92547 1522 aa15.06■□□□□ 0
ABCA9-207ENST00000495634 DNMBPQ6XZF7 1577 aa15.04■□□□□ -0
ABCA9-207ENST00000495634 CUX1P39880 1505 aa14.95□□□□□ -0.02
ABCA9-207ENST00000495634 IFT140Q96RY7 1462 aa14.95□□□□□ -0.02
ABCA9-207ENST00000495634 TARBP1Q13395 1621 aaKnown RBP14.94□□□□□ -0.02
ABCA9-207ENST00000495634 POLA1P09884 1462 aaPredicted RBP14.93□□□□□ -0.02
ABCA9-207ENST00000495634 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.9□□□□□ -0.02
ABCA9-207ENST00000495634 FGD5Q6ZNL6 1462 aa14.88□□□□□ -0.03
ABCA9-207ENST00000495634 ZNF608Q9ULD9 1512 aaPredicted RBP14.88□□□□□ -0.03
ABCA9-207ENST00000495634 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
ABCA9-207ENST00000495634 EHMT2Q96KQ7 1210 aa14.87□□□□□ -0.03
ABCA9-207ENST00000495634 BIVM-ERCC5R4GMW8 1640 aa14.85□□□□□ -0.03
ABCA9-207ENST00000495634 TOP2BQ02880 1626 aa14.85□□□□□ -0.03
ABCA9-207ENST00000495634 SOGA1O94964 1423 aa14.84□□□□□ -0.03
ABCA9-207ENST00000495634 EIF4G3O43432 1585 aaKnown RBP14.84□□□□□ -0.03
ABCA9-207ENST00000495634 DNAJC5Q9H3Z4 198 aa14.83□□□□□ -0.03
ABCA9-207ENST00000495634 WRNQ14191 1432 aaPredicted RBP eCLIP14.83□□□□□ -0.03
ABCA9-207ENST00000495634 RAD54L2Q9Y4B4 1467 aa14.83□□□□□ -0.03
ABCA9-207ENST00000495634 WDR97A6NE52 1622 aa14.83□□□□□ -0.04
ABCA9-207ENST00000495634 SYNJ1O43426 1573 aa14.83□□□□□ -0.04
ABCA9-207ENST00000495634 FOXD4L1Q9NU39 408 aa14.82□□□□□ -0.04
ABCA9-207ENST00000495634 AQRO60306 1485 aaKnown RBP eCLIP14.78□□□□□ -0.04
ABCA9-207ENST00000495634 ABCA10Q8WWZ4 1543 aa14.77□□□□□ -0.05
ABCA9-207ENST00000495634 ZBTB22O15209 634 aa14.75□□□□□ -0.05
ABCA9-207ENST00000495634 TDRD9Q8NDG6 1382 aaKnown RBP14.74□□□□□ -0.05
ABCA9-207ENST00000495634 ABCA5Q8WWZ7 1642 aa14.73□□□□□ -0.05
ABCA9-207ENST00000495634 PBRM1Q86U86 1689 aa14.68□□□□□ -0.06
ABCA9-207ENST00000495634 CSRNP3Q8WYN3 585 aa14.68□□□□□ -0.06
ABCA9-207ENST00000495634 GRIN2BQ13224 1484 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms