RNA–Protein interactions for RNA: ENST00000518525.5

GABRP-203, Transcript of gamma-aminobutyric acid type A receptor pi subunit, humanhuman

APPRIS P1 TSL 5 BASIC

Gene GABRP, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRP-203ENST00000518525 NISCHQ9Y2I1 1504 aa17.47■□□□□ 0.39
GABRP-203ENST00000518525 CCDC180Q9P1Z9 1646 aa15.06■□□□□ 0
GABRP-203ENST00000518525 ZCCHC6Q5VYS8 1495 aaKnown RBP14.72□□□□□ -0.05
GABRP-203ENST00000518525 SHROOM4Q9ULL8 1493 aa14.54□□□□□ -0.08
GABRP-203ENST00000518525 DCAF8L2P0C7V8 631 aa14.51□□□□□ -0.09
GABRP-203ENST00000518525 DCAF1Q9Y4B6 1507 aa14.41□□□□□ -0.1
GABRP-203ENST00000518525 MYO15BQ96JP2 1530 aa14.15□□□□□ -0.14
GABRP-203ENST00000518525 SUPT5HO00267 1087 aaKnown RBP14.14□□□□□ -0.15
GABRP-203ENST00000518525 ABCC9O60706 1549 aa14.12□□□□□ -0.15
GABRP-203ENST00000518525 NACADO15069 1562 aa14.01□□□□□ -0.17
GABRP-203ENST00000518525 SCRIBQ14160 1630 aa13.96□□□□□ -0.18
GABRP-203ENST00000518525 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
GABRP-203ENST00000518525 RSF1Q96T23 1441 aaPredicted RBP13.67□□□□□ -0.22
GABRP-203ENST00000518525 CHIC1Q5VXU3 224 aa13.61□□□□□ -0.23
GABRP-203ENST00000518525 PPARGC1BQ86YN6 1023 aaKnown RBP13.57□□□□□ -0.24
GABRP-203ENST00000518525 CECR2Q9BXF3 1484 aa13.57□□□□□ -0.24
GABRP-203ENST00000518525 MROH2BQ7Z745 1585 aa13.51□□□□□ -0.25
GABRP-203ENST00000518525 UNC13AQ9UPW8 1703 aa13.49□□□□□ -0.25
GABRP-203ENST00000518525 PELP1Q8IZL8 1130 aaKnown RBP13.48□□□□□ -0.25
GABRP-203ENST00000518525 BAZ1AQ9NRL2 1556 aaPredicted RBP13.48□□□□□ -0.25
GABRP-203ENST00000518525 HRCP23327 699 aa13.41□□□□□ -0.26
GABRP-203ENST00000518525 PABPN1Q86U42 306 aaKnown RBP eCLIP13.41□□□□□ -0.26
GABRP-203ENST00000518525 WIZO95785 1651 aa13.4□□□□□ -0.26
GABRP-203ENST00000518525 BICRAQ9NZM4 1560 aa13.38□□□□□ -0.27
GABRP-203ENST00000518525 SMARCA4P51532 1647 aa13.36□□□□□ -0.27
GABRP-203ENST00000518525 PCGF6Q9BYE7 350 aa13.36□□□□□ -0.27
GABRP-203ENST00000518525 TOP2AP11388 1531 aaKnown RBP13.27□□□□□ -0.28
GABRP-203ENST00000518525 TRIM41Q8WV44 630 aa13.27□□□□□ -0.29
GABRP-203ENST00000518525 CCDC88BA6NC98 1476 aa13.16□□□□□ -0.3
GABRP-203ENST00000518525 PEG3Q9GZU2 1588 aa13.16□□□□□ -0.3
GABRP-203ENST00000518525 SMARCA2P51531 1590 aa13.15□□□□□ -0.3
GABRP-203ENST00000518525 LOC105371045A0A1W2PR82 267 aa13.12□□□□□ -0.31
GABRP-203ENST00000518525 ATAD2BQ9ULI0 1458 aa13.11□□□□□ -0.31
GABRP-203ENST00000518525 EIF4G1Q04637 1599 aaKnown RBP13.09□□□□□ -0.31
GABRP-203ENST00000518525 SCAF1Q9H7N4 1312 aaKnown RBP13.09□□□□□ -0.31
GABRP-203ENST00000518525 BAZ1BQ9UIG0 1483 aaKnown RBP13.08□□□□□ -0.32
GABRP-203ENST00000518525 FAM9AQ8IZU1 332 aaPredicted RBP13.06□□□□□ -0.32
GABRP-203ENST00000518525 MYT1Q01538 1121 aa13□□□□□ -0.33
GABRP-203ENST00000518525 ABCC8Q09428 1581 aa12.97□□□□□ -0.33
GABRP-203ENST00000518525 NCAPD3P42695 1498 aa12.94□□□□□ -0.34
GABRP-203ENST00000518525 HMGXB3Q12766 1538 aa12.93□□□□□ -0.34
GABRP-203ENST00000518525 WRNQ14191 1432 aaPredicted RBP eCLIP12.89□□□□□ -0.35
GABRP-203ENST00000518525 EHMT2Q96KQ7 1210 aa12.89□□□□□ -0.35
GABRP-203ENST00000518525 EEA1Q15075 1411 aa12.84□□□□□ -0.35
GABRP-203ENST00000518525 SOGA1O94964 1423 aa12.8□□□□□ -0.36
GABRP-203ENST00000518525 CSRNP3Q8WYN3 585 aa12.78□□□□□ -0.36
GABRP-203ENST00000518525 SYNJ1O43426 1573 aa12.77□□□□□ -0.36
GABRP-203ENST00000518525 TRIM26Q12899 539 aaPredicted RBP12.74□□□□□ -0.37
GABRP-203ENST00000518525 CFTRP13569 1480 aa12.73□□□□□ -0.37
GABRP-203ENST00000518525 CC2D2AQ9P2K1 1620 aa12.73□□□□□ -0.37
GABRP-203ENST00000518525 GTF3C3Q9Y5Q9 886 aa12.72□□□□□ -0.37
GABRP-203ENST00000518525 RUSC2Q8N2Y8 1516 aa12.71□□□□□ -0.37
GABRP-203ENST00000518525 TOP2BQ02880 1626 aa12.7□□□□□ -0.38
GABRP-203ENST00000518525 UBTFP17480 764 aaKnown RBP12.69□□□□□ -0.38
GABRP-203ENST00000518525 GOLGA3Q08378 1498 aa12.68□□□□□ -0.38
GABRP-203ENST00000518525 TNIKQ9UKE5 1360 aa12.68□□□□□ -0.38
GABRP-203ENST00000518525 CADPSQ9ULU8 1353 aa12.67□□□□□ -0.38
GABRP-203ENST00000518525 BIVM-ERCC5R4GMW8 1640 aa12.65□□□□□ -0.38
GABRP-203ENST00000518525 CEP164Q9UPV0 1460 aa12.65□□□□□ -0.38
GABRP-203ENST00000518525 CEP162Q5TB80 1403 aa12.65□□□□□ -0.39
GABRP-203ENST00000518525 NEUROD1Q13562 356 aa12.64□□□□□ -0.39
GABRP-203ENST00000518525 CUX1P39880 1505 aa12.62□□□□□ -0.39
GABRP-203ENST00000518525 KIF21BO75037 1637 aa12.61□□□□□ -0.39
GABRP-203ENST00000518525 PRDM2Q13029 1718 aa12.6□□□□□ -0.39
GABRP-203ENST00000518525 YTHDC1Q96MU7 727 aaKnown RBP12.59□□□□□ -0.39
GABRP-203ENST00000518525 ACIN1Q9UKV3 1341 aaKnown RBP12.56□□□□□ -0.4
GABRP-203ENST00000518525 KIF27Q86VH2 1401 aa12.56□□□□□ -0.4
GABRP-203ENST00000518525 RAPGEF2Q9Y4G8 1499 aa12.53□□□□□ -0.4
GABRP-203ENST00000518525 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
GABRP-203ENST00000518525 FANCD2Q9BXW9 1451 aa12.52□□□□□ -0.4
GABRP-203ENST00000518525 CLIP1P30622 1438 aa12.51□□□□□ -0.41
GABRP-203ENST00000518525 ERICH3Q5RHP9 1530 aa12.49□□□□□ -0.41
GABRP-203ENST00000518525 PRXQ9BXM0 1461 aa12.49□□□□□ -0.41
GABRP-203ENST00000518525 CENPBP07199 599 aaPredicted RBP12.48□□□□□ -0.41
GABRP-203ENST00000518525 CUX2O14529 1486 aa12.46□□□□□ -0.41
GABRP-203ENST00000518525 FGD5Q6ZNL6 1462 aa12.46□□□□□ -0.41
GABRP-203ENST00000518525 NESP48681 1621 aa12.45□□□□□ -0.42
GABRP-203ENST00000518525 LAMC3Q9Y6N6 1575 aa12.45□□□□□ -0.42
GABRP-203ENST00000518525 DNMBPQ6XZF7 1577 aa12.43□□□□□ -0.42
GABRP-203ENST00000518525 RANGAP1P46060 587 aaPredicted RBP12.43□□□□□ -0.42
GABRP-203ENST00000518525 VPS8Q8N3P4 1428 aa12.41□□□□□ -0.42
GABRP-203ENST00000518525 TTBK1Q5TCY1 1321 aaPredicted RBP12.41□□□□□ -0.42
GABRP-203ENST00000518525 APLP2Q06481 763 aa12.41□□□□□ -0.42
GABRP-203ENST00000518525 PDS5BQ9NTI5 1447 aa12.41□□□□□ -0.42
GABRP-203ENST00000518525 TOPBP1Q92547 1522 aa12.4□□□□□ -0.42
GABRP-203ENST00000518525 ZEB1P37275 1124 aaPredicted RBP12.39□□□□□ -0.43
GABRP-203ENST00000518525 IGF1RP08069 1367 aa12.39□□□□□ -0.43
GABRP-203ENST00000518525 POLA1P09884 1462 aaPredicted RBP12.36□□□□□ -0.43
GABRP-203ENST00000518525 DNAJC5BQ9UF47 199 aa12.36□□□□□ -0.43
GABRP-203ENST00000518525 CARMIL1Q5VZK9 1371 aa12.36□□□□□ -0.43
GABRP-203ENST00000518525 ABCA10Q8WWZ4 1543 aa12.34□□□□□ -0.43
GABRP-203ENST00000518525 RAD54L2Q9Y4B4 1467 aa12.33□□□□□ -0.43
GABRP-203ENST00000518525 URB2Q14146 1524 aaKnown RBP12.32□□□□□ -0.44
GABRP-203ENST00000518525 PRKCSHP14314 528 aaPredicted RBP12.32□□□□□ -0.44
GABRP-203ENST00000518525 ARAP1Q96P48 1450 aa12.29□□□□□ -0.44
GABRP-203ENST00000518525 ARHGAP35Q9NRY4 1499 aa12.25□□□□□ -0.45
GABRP-203ENST00000518525 KIF21AQ7Z4S6 1674 aa12.25□□□□□ -0.45
GABRP-203ENST00000518525 DIEXFQ68CQ4 756 aaKnown RBP12.25□□□□□ -0.45
GABRP-203ENST00000518525 CCER1Q8TC90 406 aaPredicted RBP12.25□□□□□ -0.45
GABRP-203ENST00000518525 CUL7Q14999 1698 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms